Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   psbD   photosystem II protein D2 
 bna-r.1   125604651   photosystem II D2 protein 
 bna-r.1   125601392   photosystem II D2 protein 
 bna-r.1   125601655   photosystem II D2 protein 
 bra-r.6   117126101   photosystem II D2 protein 
 ath-u.5   psbD   photosystem II protein D2 
 ghi-r.1   121213538   photosystem II D2 protein 
 ghi-r.1   psbD   photosystem II protein D2 
 cit-r.1   psbD   photosystem II protein D2 
 gma-u.5   psbD   photosystem II protein D2 
 vvi-u.5   psbD   photosystem II protein D2 
 ppo-u.5   psbD   photosystem II protein D2 
 mtr-u.5   psbD   photosystem II protein D2 
 sly-u.5   psbD   photosystem II protein D2 
 sot-r.1   psbD   photosystem II protein D2 
 nta-r.1   psbD   photosystem II protein D2 
 osa-u.5   psbD   photosystem II protein D2 
 zma-u.5   psbD   photosystem II protein D2 
 zma-u.5   118475437   photosystem II D2 protein 
 zma-u.5   118475934   photosystem II D2 protein 
 tae-r.2   123051035   photosystem II D2 protein-like 
 tae-r.2   123045574   photosystem II D2 protein-like 
 tae-r.2   123143574   photosystem II D2 protein-like 
 hvu-r.1   123422267   photosystem II D2 protein 
 hvu-r.1   123421985   photosystem II D2 protein 
 hvu-r.1   123421743   photosystem II D2 protein 
 sbi-r.1   psbD   photosystem II protein D2 
 bdi-r.1   psbD   photosystem II protein D2 

close


Top 50 coexpressed genes to psbD (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to psbD (bna-r.1 coexpression data)

CoexMap"11542039"


bnapsbD | Entrez gene ID : 11542039    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 1 2 1 1 1 1 1 1 1 1 1 3 3 3 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna00195 [list] [network] Photosynthesis (310 genes)
GO BP
GO CC
GO MF
Protein YP_005089947.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  mito 3,  chlo 1,  cyto_mito 1  (predict for YP_005089947.1)
Subcellular
localization
TargetP
other 9  (predict for YP_005089947.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
psbD
bna-r.1
for
125604651
bna-r.1
for
125601392
bna-r.1
for
125601655
bra-r.6
for
117126101
ath-u.5
for
psbD
ghi-r.1
for
121213538
ghi-r.1
for
psbD
cit-r.1
for
psbD
gma-u.5
for
psbD
vvi-u.5
for
psbD
ppo-u.5
for
psbD
mtr-u.5
for
psbD
sly-u.5
for
psbD
sot-r.1
for
psbD
nta-r.1
for
psbD
osa-u.5
for
psbD
zma-u.5
for
psbD
zma-u.5
for
118475437
zma-u.5
for
118475934
tae-r.2
for
123051035
tae-r.2
for
123045574
tae-r.2
for
123143574
hvu-r.1
for
123422267
hvu-r.1
for
123421985
hvu-r.1
for
123421743
sbi-r.1
for
psbD
bdi-r.1
for
psbD


Ortholog ID: 1774
Species bna bna bra ath ghi ghi cit gma vvi ppo mtr sly sot nta osa zma zma zma tae tae hvu hvu hvu sbi bdi
Symbol psbD LOC125606695 LOC117126101 psbD LOC121213538 psbD psbD psbD psbD psbD psbD psbD psbD psbD psbD psbD LOC118475437 LOC118475934 LOC123051035 LOC123056199 LOC123421985 LOC123418889 LOC123419405 psbD psbD
Function* photosystem II protein D2 photosystem II D2 protein photosystem II D2 protein photosystem II protein D2 photosystem II D2 protein photosystem II protein D2 photosystem II protein D2 photosystem II protein D2 photosystem II protein D2 photosystem II protein D2 photosystem II protein D2 photosystem II protein D2 photosystem II protein D2 photosystem II protein D2 photosystem II protein D2 photosystem II protein D2 photosystem II D2 protein photosystem II D2 protein photosystem II D2 protein-like photosystem II D2 protein photosystem II D2 protein photosystem II D2 protein photosystem II D2 protein photosystem II protein D2 photosystem II protein D2
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 6
bra00630 Glyoxylate and dicarboxylate metabolism 2
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 15
ath00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 9
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 15
gma00190 Oxidative phosphorylation 4
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 12
vvi03010 Ribosome 2
vvi00630 Glyoxylate and dicarboxylate metabolism 2
vvi00710 Carbon fixation by Calvin cycle 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 14
ppo00190 Oxidative phosphorylation 4
ppo00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 7
mtr03010 Ribosome 5
mtr00190 Oxidative phosphorylation 3
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 13
sly00970 Aminoacyl-tRNA biosynthesis 2
sly00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 12
sot00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 12
nta00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 13
osa03010 Ribosome 5
osa00190 Oxidative phosphorylation 4
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 15
zma03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 11
zma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 14
zma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 11
tae00190 Oxidative phosphorylation 2
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00195 Photosynthesis 8
sbi03010 Ribosome 8
sbi03008 Ribosome biogenesis in eukaryotes 2
sbi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 6
bdi00970 Aminoacyl-tRNA biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11542039 125606695 117126101 844775 121213538 3989205 4271200 3989284 4025083 4929654 5333170 3950483 4099961 800525 3131412 845202 118475437 118475934 123051035 123056199 123421985 123418889 123419405 4549103 6439844
The preparation time of this page was 0.1 [sec].