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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   petA   cytochrome f 
 ghi-r.1   petA   apocytochrome f precursor 
 cit-r.1   petA   cytochrome f 
 gma-u.5   121173225   cytochrome f-like 
 gma-u.5   petA   apocytochrome f precursor 
 vvi-u.5   petA   apocytochrome f precursor 
 vvi-u.5   petA   cytochrome f 
 ppo-u.5   petA   cytochrome f 
 mtr-u.5   120580077   cytochrome f 
 mtr-u.5   120580171   cytochrome f 
 mtr-u.5   petA   cytochrome f 
 sly-u.5   petA   cytochrome f 
 sot-r.1   petA   cytochrome f 
 nta-r.1   petA   apocytochrome f precursor 
 osa-u.5   petA   cytochrome f 
 zma-u.5   118473655   cytochrome f 
 zma-u.5   118474823   cytochrome f 
 sbi-r.1   petA   cytochrome f 
 bdi-r.1   petA   cytochrome f 

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Top 50 coexpressed genes to petA (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to petA (ath-u.5 coexpression data)

CoexMap"11542074"


bnapetA | Entrez gene ID : 11542074    
Species ath ghi cit gma vvi ppo mtr sly sot nta osa zma sbi bdi bra cre tae bna hvu
Paralog 1 1 1 2 2 1 3 1 1 1 1 2 1 1 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna00195 [list] [network] Photosynthesis (310 genes)
GO BP
GO CC
GO MF
Protein YP_005089965.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  cyto_nucl 3,  chlo 2,  nucl 1,  golg 1,  cysk_nucl 1  (predict for YP_005089965.1)
Subcellular
localization
TargetP
other 4  (predict for YP_005089965.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ath-u.5
for
petA
ghi-r.1
for
petA
cit-r.1
for
petA
gma-u.5
for
121173225
gma-u.5
for
petA
vvi-u.5
for
petA
vvi-u.5
for
petA
ppo-u.5
for
petA
mtr-u.5
for
120580077
mtr-u.5
for
120580171
mtr-u.5
for
petA
sly-u.5
for
petA
sot-r.1
for
petA
nta-r.1
for
petA
osa-u.5
for
petA
zma-u.5
for
118473655
zma-u.5
for
118474823
sbi-r.1
for
petA
bdi-r.1
for
petA


Ortholog ID: 7101
Species ath ghi cit gma gma vvi vvi ppo mtr mtr mtr sly sot nta osa zma sbi bdi
Symbol petA petA petA LOC121173225 petA petA petA petA LOC120580077 LOC120580171 petA petA petA petA petA LOC118474823 petA petA
Function* cytochrome f apocytochrome f precursor cytochrome f cytochrome f-like apocytochrome f precursor apocytochrome f precursor cytochrome f cytochrome f cytochrome f cytochrome f cytochrome f cytochrome f cytochrome f apocytochrome f precursor cytochrome f cytochrome f cytochrome f cytochrome f
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 11
ath00190 Oxidative phosphorylation 4
ath00970 Aminoacyl-tRNA biosynthesis 3
ath01200 Carbon metabolism 2
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 6
ghi00061 Fatty acid biosynthesis 3
ghi00620 Pyruvate metabolism 3
ghi00640 Propanoate metabolism 3
ghi01212 Fatty acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 9
cit00190 Oxidative phosphorylation 5
cit01200 Carbon metabolism 3
cit03020 RNA polymerase 2
cit00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 5
gma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 5
gma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 7
vvi00195 Photosynthesis 6
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 7
vvi00195 Photosynthesis 6
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 7
ppo03020 RNA polymerase 5
ppo00195 Photosynthesis 3
ppo00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 13
mtr00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 11
mtr00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 12
mtr00195 Photosynthesis 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 11
sly00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 13
sot00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 8
nta00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 10
osa00190 Oxidative phosphorylation 4
osa03020 RNA polymerase 3
osa00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 9
zma00630 Glyoxylate and dicarboxylate metabolism 3
zma00710 Carbon fixation by Calvin cycle 3
zma01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 7
sbi00195 Photosynthesis 6
sbi00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 11
bdi00190 Oxidative phosphorylation 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844748 3989162 4271218 121173225 3989309 4025050 7498572 4929683 120580077 120580171 5333092 3950466 4099990 800461 3131402 118474823 4549172 6439865
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