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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   117128071   E3 ubiquitin-protein ligase UPL1 
 gma-u.5   100812184   E3 ubiquitin-protein ligase UPL1 
 gma-u.5   100802630   E3 ubiquitin-protein ligase UPL1 
 gma-u.5   100788161   E3 ubiquitin-protein ligase UPL1 
 vvi-u.5   100255704   E3 ubiquitin-protein ligase UPL2 
 ppo-u.5   7467222   E3 ubiquitin-protein ligase UPL1 
 mtr-u.5   25489905   E3 ubiquitin-protein ligase UPL1 
 mtr-u.5   11442326   E3 ubiquitin-protein ligase UPL1 
 sly-u.5   101261615   E3 ubiquitin-protein ligase UPL2 
 osa-u.5   4352108   E3 ubiquitin-protein ligase UPL2 
 zma-u.5   103650429   E3 ubiquitin-protein ligase UPL1 
 zma-u.5   100384278   E3 ubiquitin-protein ligase UPL1 

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Top 50 coexpressed genes to 117128071 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 117128071 (bra-r.6 coexpression data)

CoexMap"117128071"


braLOC117128071 | Entrez gene ID : 117128071    
Species bra gma vvi ppo mtr sly osa zma bdi hvu cit bna ath sbi ghi sot nta cre tae
Paralog 1 3 1 1 2 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG brp04120 [list] [network] Ubiquitin mediated proteolysis (225 genes)
GO BP
GO:0045732 [list] [network] positive regulation of protein catabolic process  (75 genes)  IEA  
GO:0000209 [list] [network] protein polyubiquitination  (133 genes)  IEA  
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (232 genes)  IEA  
GO CC
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (531 genes)  IEA  
GO:0005515 [list] [network] protein binding  (6277 genes)  IEA  
Protein XP_033135472.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 3,  cyto 2,  chlo_mito 2  (predict for XP_033135472.1)
Subcellular
localization
TargetP
mito 5,  chlo 3  (predict for XP_033135472.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
117128071
gma-u.5
for
100812184
gma-u.5
for
100802630
gma-u.5
for
100788161
vvi-u.5
for
100255704
ppo-u.5
for
7467222
mtr-u.5
for
25489905
mtr-u.5
for
11442326
sly-u.5
for
101261615
osa-u.5
for
4352108
zma-u.5
for
103650429
zma-u.5
for
100384278


Ortholog ID: 5440
Species bra bra bna bna ghi ghi cit gma gma vvi ppo mtr mtr sly sot nta nta osa zma zma tae tae hvu sbi bdi cre
Symbol LOC103838597 LOC117128071 LOC125593466 LOC106434965 LOC107957537 LOC107957835 LOC102609169 LOC100802630 LOC100812184 LOC100255704 LOC7467222 LOC11442326 LOC25489905 LOC101261615 LOC102596804 LOC107785026 LOC107806692 LOC4352108 LOC100384278 LOC103650429 LOC123110957 LOC123119938 LOC123399924 LOC8061253 LOC100821130 CHLRE_01g012450v5
Function* E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1-like E3 ubiquitin-protein ligase UPL1-like E3 ubiquitin-protein ligase UPL2 E3 ubiquitin-protein ligase UPL2-like E3 ubiquitin-protein ligase UPL2-like E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL2 E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL2 E3 ubiquitin-protein ligase UPL1-like E3 ubiquitin-protein ligase UPL2 E3 ubiquitin-protein ligase UPL2-like E3 ubiquitin-protein ligase UPL2 E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL2 E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1-like E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 4
bra03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 5
bna03015 mRNA surveillance pathway 2
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna03082 ATP-dependent chromatin remodeling 3
bna03015 mRNA surveillance pathway 2
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 8
ghi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 7
gma03082 ATP-dependent chromatin remodeling 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 5
gma03040 Spliceosome 3
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 5
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 5
mtr03082 ATP-dependent chromatin remodeling 2
mtr00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 6
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 4
tae00310 Lysine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 4
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 3
bdi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 3
cre03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103838597 117128071 125593466 106434965 107957537 107957835 102609169 100802630 100812184 100255704 7467222 11442326 25489905 101261615 102596804 107785026 107806692 4352108 100384278 103650429 123110957 123119938 123399924 8061253 100821130 5715054
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