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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   118473916   50S ribosomal protein L2, chloroplastic-like 
 zma-r.6   118473916   50S ribosomal protein L2, chloroplastic-like 
 zma-u.5   118475605   50S ribosomal protein L2, chloroplastic 
 zma-u.5   118475751   50S ribosomal protein L2, chloroplastic-like 
 sbi-r.1   rpl2   ribosomal protein L2 
 sbi-r.1   rpl2   ribosomal protein L2 
 osa-u.5   112936211   large ribosomal subunit protein uL2cz/uL2cy 
 osa-u.5   107278854   large ribosomal subunit protein uL2cz/uL2cy 
 osa-u.5   107281913   large ribosomal subunit protein uL2cz/uL2cy-like 
 tae-r.2   123175015   50S ribosomal protein L2, chloroplastic 
 tae-r.2   123142565   50S ribosomal protein L2, chloroplastic-like 
 tae-r.2   123067460   50S ribosomal protein L2, chloroplastic-like 
 bdi-r.1   112270107   50S ribosomal protein L2, chloroplastic 
 bdi-r.1   rpl2   ribosomal protein L2 
 bdi-r.1   rpl2   ribosomal protein L2 
 ath-u.5   rpl2   ribosomal protein L2 
 ath-u.5   rpl2   ribosomal protein L2 
 gma-u.5   rpl2   50S ribosomal protein L2 
 gma-u.5   rpl2   50S ribosomal protein L2 
 sly-u.5   rpl2   ribosomal protein L2 
 sly-u.5   rpl2   ribosomal protein L2 
 vvi-u.5   rpl2   50S ribosomal protein L2 
 ppo-u.5   rpl2   ribosomal protein L2 
 ppo-u.5   rpl2   ribosomal protein L2 
 mtr-u.5   rpl2   ribosomal protein L2 
 mtr-u.5   120580177   50S ribosomal protein L2, chloroplastic 
 mtr-u.5   11413403   50S ribosomal protein L2, chloroplastic 
 ghi-r.1   rpl2   50S ribosomal protein L2 
 ghi-r.1   rpl2   50S ribosomal protein L2 
 ghi-r.1   121227930   50S ribosomal protein L2, chloroplastic 
 bna-r.1   125595257   50S ribosomal protein L2, chloroplastic 
 bna-r.1   125595273   50S ribosomal protein L2, chloroplastic 
 bna-r.1   125599715   50S ribosomal protein L2, chloroplastic 
 sot-r.1   rpl2   ribosomal protein L2 
 sot-r.1   rpl2   ribosomal protein L2 
 cit-r.1   127901767   50S ribosomal protein L2, chloroplastic 
 cit-r.1   rpl2   ribosomal protein L2 
 cit-r.1   rpl2   ribosomal protein L2 
 nta-r.1   rpl2   50S ribosomal protein L2 
 nta-r.1   rpl2   50S ribosomal protein L2 

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Top 50 coexpressed genes to 118473916 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 118473916 (zma-u.5 coexpression data)

CoexMap"118473916"


zmaLOC118473916 | Entrez gene ID : 118473916    
Species zma sbi osa tae bdi ath gma sly vvi ppo mtr ghi bna sot cit nta bra cre hvu
Paralog 4 2 3 3 3 2 2 2 1 2 3 3 3 2 3 2 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma03010 [list] [network] Ribosome (2925 genes)
GO BP
GO:0032543 [list] [network] mitochondrial translation  (35 genes)  IEA  
GO CC
GO:0005762 [list] [network] mitochondrial large ribosomal subunit  (27 genes)  IEA  
GO:0005840 [list] [network] ribosome  (477 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (479 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1549 genes)  IEA  
GO:0016740 [list] [network] transferase activity  (4165 genes)  IEA  
Protein XP_035819549.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 4,  nucl 1,  mito 1  (predict for XP_035819549.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_035819549.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
118473916
zma-r.6
for
118473916
zma-u.5
for
118475605
zma-u.5
for
118475751
sbi-r.1
for
rpl2
sbi-r.1
for
rpl2
osa-u.5
for
112936211
osa-u.5
for
107278854
osa-u.5
for
107281913
tae-r.2
for
123175015
tae-r.2
for
123142565
tae-r.2
for
123067460
bdi-r.1
for
112270107
bdi-r.1
for
rpl2
bdi-r.1
for
rpl2
ath-u.5
for
rpl2
ath-u.5
for
rpl2
gma-u.5
for
rpl2
gma-u.5
for
rpl2
sly-u.5
for
rpl2
sly-u.5
for
rpl2
vvi-u.5
for
rpl2
ppo-u.5
for
rpl2
ppo-u.5
for
rpl2
mtr-u.5
for
rpl2
mtr-u.5
for
120580177
mtr-u.5
for
11413403
ghi-r.1
for
rpl2
ghi-r.1
for
rpl2
ghi-r.1
for
121227930
bna-r.1
for
125595257
bna-r.1
for
125595273
bna-r.1
for
125599715
sot-r.1
for
rpl2
sot-r.1
for
rpl2
cit-r.1
for
127901767
cit-r.1
for
rpl2
cit-r.1
for
rpl2
nta-r.1
for
rpl2
nta-r.1
for
rpl2


Ortholog ID: 963
Species zma sbi sbi osa osa osa tae bdi bdi bdi ath ath gma gma sly sly vvi ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna sot sot cit cit cit nta nta
Symbol LOC118475605 rpl2 rpl2 LOC112936211 LOC107278854 rpl2 LOC123067460 LOC112270107 rpl2 rpl2 rpl2 rpl2 rpl2 rpl2 rpl2 rpl2 rpl2 rpl2 rpl2 rpl2 LOC120580177 LOC120579682 rpl2 rpl2 LOC121227930 LOC125602601 LOC125602602 rpl2 rpl2 rpl2 LOC127901767 rpl2 rpl2 rpl2 rpl2
Function* 50S ribosomal protein L2, chloroplastic ribosomal protein L2 ribosomal protein L2 large ribosomal subunit protein uL2cz/uL2cy large ribosomal subunit protein uL2cz/uL2cy ribosomal protein L2 50S ribosomal protein L2, chloroplastic-like 50S ribosomal protein L2, chloroplastic ribosomal protein L2 ribosomal protein L2 ribosomal protein L2 ribosomal protein L2 50S ribosomal protein L2 50S ribosomal protein L2 ribosomal protein L2 ribosomal protein L2 50S ribosomal protein L2 ribosomal protein L2 ribosomal protein L2 ribosomal protein L2 50S ribosomal protein L2, chloroplastic 50S ribosomal protein L2, chloroplastic 50S ribosomal protein L2 50S ribosomal protein L2 50S ribosomal protein L2, chloroplastic 50S ribosomal protein L2, chloroplastic 50S ribosomal protein L2, chloroplastic ribosomal protein L2 ribosomal protein L2 ribosomal protein L2 50S ribosomal protein L2, chloroplastic ribosomal protein L2 ribosomal protein L2 50S ribosomal protein L2 50S ribosomal protein L2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 14
zma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 18
sbi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 16
osa00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 14
osa00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 10
bdi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 10
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 9
bdi00970 Aminoacyl-tRNA biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 9
ath00970 Aminoacyl-tRNA biosynthesis 5
ath00190 Oxidative phosphorylation 5
ath00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 9
ath00970 Aminoacyl-tRNA biosynthesis 5
ath00190 Oxidative phosphorylation 5
ath00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 14
gma00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 12
gma00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 13
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 10
vvi03010 Ribosome 6
vvi00195 Photosynthesis 6
vvi00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 11
ppo03020 RNA polymerase 3
ppo00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 10
ppo03020 RNA polymerase 5
ppo00190 Oxidative phosphorylation 3
ppo00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 5
bna00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 5
bna00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 7
sot00190 Oxidative phosphorylation 6
sot00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 7
sot00190 Oxidative phosphorylation 6
sot00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 11
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 10
nta00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta00195 Photosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 118475605 4549094 4549142 112936211 107278854 3131421 123067460 112270107 6439799 6439900 1466246 844718 3989337 3989255 3950470 16976780 4025024 4929714 4929771 5333096 120580177 120579682 3989144 3989225 121227930 125602601 125602602 11542042 4099885 4099928 127901767 4271193 36487024 800420 800468
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