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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   120580177   50S ribosomal protein L2, chloroplastic 
 mtr-r.5   120580177   50S ribosomal protein L2, chloroplastic 
 mtr-u.5   rpl2   ribosomal protein L2 
 mtr-u.5   120579682   50S ribosomal protein L2, chloroplastic 
 mtr-u.5   11413403   50S ribosomal protein L2, chloroplastic 
 gma-u.5   rpl2   50S ribosomal protein L2 
 gma-u.5   rpl2   50S ribosomal protein L2 
 ppo-u.5   rpl2   ribosomal protein L2 
 ppo-u.5   rpl2   ribosomal protein L2 
 ath-u.5   rpl2   ribosomal protein L2 
 ath-u.5   rpl2   ribosomal protein L2 
 vvi-u.5   rpl2   50S ribosomal protein L2 
 sly-u.5   rpl2   ribosomal protein L2 
 sly-u.5   rpl2   ribosomal protein L2 
 osa-u.5   112936211   large ribosomal subunit protein uL2cz/uL2cy 
 osa-u.5   107280605   large ribosomal subunit protein uL2cz/uL2cy 
 osa-u.5   107280606   large ribosomal subunit protein uL2cz/uL2cy 
 zma-u.5   118473916   50S ribosomal protein L2, chloroplastic-like 

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Top 50 coexpressed genes to 120580177 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 120580177 (mtr-u.5 coexpression data)

CoexMap"120580177"


mtrLOC120580177 | Entrez gene ID : 120580177    
Species mtr gma ppo ath vvi sly osa zma hvu bna cit bra ghi sbi bdi nta tae cre sot
Paralog 5 2 2 2 1 2 3 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG mtr03010 [list] [network] Ribosome (1813 genes)
GO BP
GO:0032543 [list] [network] mitochondrial translation  (57 genes)  IEA  
GO CC
GO:0005762 [list] [network] mitochondrial large ribosomal subunit  (34 genes)  IEA  
GO:0005840 [list] [network] ribosome  (372 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (369 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1400 genes)  IEA  
GO:0016740 [list] [network] transferase activity  (3911 genes)  IEA  
Protein XP_039689498.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 3,  cyto_pero 3,  cyto_E.R. 3,  cyto_plas 3  (predict for XP_039689498.1)
Subcellular
localization
TargetP
mito 8,  other 3  (predict for XP_039689498.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
120580177
mtr-r.5
for
120580177
mtr-u.5
for
rpl2
mtr-u.5
for
120579682
mtr-u.5
for
11413403
gma-u.5
for
rpl2
gma-u.5
for
rpl2
ppo-u.5
for
rpl2
ppo-u.5
for
rpl2
ath-u.5
for
rpl2
ath-u.5
for
rpl2
vvi-u.5
for
rpl2
sly-u.5
for
rpl2
sly-u.5
for
rpl2
osa-u.5
for
112936211
osa-u.5
for
107280605
osa-u.5
for
107280606
zma-u.5
for
118473916


Ortholog ID: 963
Species mtr mtr gma gma ppo ppo ath ath vvi ghi ghi bna bna cit cit sly sly sot sot nta osa osa zma tae sbi sbi bdi bdi
Symbol LOC120580177 LOC120579682 rpl2 rpl2 rpl2 rpl2 rpl2 rpl2 rpl2 rpl2 LOC121227930 rpl2 LOC125602601 LOC127901767 rpl2 rpl2 rpl2 rpl2 rpl2 rpl2 LOC107278854 LOC112936211 LOC118475605 LOC123067460 rpl2 rpl2 LOC112270107 rpl2
Function* 50S ribosomal protein L2, chloroplastic 50S ribosomal protein L2, chloroplastic 50S ribosomal protein L2 50S ribosomal protein L2 ribosomal protein L2 ribosomal protein L2 ribosomal protein L2 ribosomal protein L2 50S ribosomal protein L2 50S ribosomal protein L2 50S ribosomal protein L2, chloroplastic ribosomal protein L2 50S ribosomal protein L2, chloroplastic 50S ribosomal protein L2, chloroplastic ribosomal protein L2 ribosomal protein L2 ribosomal protein L2 ribosomal protein L2 ribosomal protein L2 50S ribosomal protein L2 large ribosomal subunit protein uL2cz/uL2cy large ribosomal subunit protein uL2cz/uL2cy 50S ribosomal protein L2, chloroplastic 50S ribosomal protein L2, chloroplastic-like ribosomal protein L2 ribosomal protein L2 50S ribosomal protein L2, chloroplastic ribosomal protein L2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 12
gma00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 14
gma00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 11
ppo03020 RNA polymerase 3
ppo00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 10
ppo03020 RNA polymerase 5
ppo00190 Oxidative phosphorylation 3
ppo00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 9
ath00970 Aminoacyl-tRNA biosynthesis 5
ath00190 Oxidative phosphorylation 5
ath00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 9
ath00970 Aminoacyl-tRNA biosynthesis 5
ath00190 Oxidative phosphorylation 5
ath00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 10
vvi03010 Ribosome 6
vvi00195 Photosynthesis 6
vvi00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 5
bna00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 11
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 13
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 7
sot00190 Oxidative phosphorylation 6
sot00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 7
sot00190 Oxidative phosphorylation 6
sot00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 10
nta00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 16
osa00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 14
zma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 18
sbi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 10
bdi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 10
bdi00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 120580177 120579682 3989255 3989337 4929714 4929771 1466246 844718 4025024 3989144 121227930 11542042 125602601 127901767 4271193 3950470 16976780 4099885 4099928 800420 107278854 112936211 118475605 123067460 4549142 4549094 112270107 6439799
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