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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   118475062   DNA-directed RNA polymerase subunit beta'' 
 zma-u.5   109943315   DNA-directed RNA polymerase subunit beta'-like 
 osa-u.5   rpoC2   RNA polymerase beta'' subunit 
 ath-u.5   rpoC2   RNA polymerase beta'' subunit 
 gma-u.5   rpoC2   RNA polymerase beta'' chain 
 sly-u.5   rpoC2   RNA polymerase beta' subunit 
 vvi-u.5   rpoC2   RNA polymerase beta'' chain 
 ppo-u.5   rpoC2   RNA polymerase beta'' subunit 
 mtr-u.5   120579890   DNA-directed RNA polymerase subunit beta'' 
 mtr-u.5   rpoC2   RNA polymerase beta'' subunit 

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Top 50 coexpressed genes to 118475062 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 118475062 (zma-u.5 coexpression data)

CoexMap"118475928"


zmaLOC118475928 | Entrez gene ID : 118475928    
Species zma osa ath gma sly vvi ppo mtr bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 2 1 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma03020 [list] [network] RNA polymerase (74 genes)
GO BP
GO:0006351 [list] [network] DNA-templated transcription  (326 genes)  IEA  
GO CC
GO MF
GO:0003899 [list] [network] DNA-directed RNA polymerase activity  (37 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2288 genes)  IEA  
Protein XP_035819879.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 2,  chlo 1,  cysk_nucl 1  (predict for XP_035819879.1)
Subcellular
localization
TargetP
other 8  (predict for XP_035819879.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
118475062
zma-u.5
for
109943315
osa-u.5
for
rpoC2
ath-u.5
for
rpoC2
gma-u.5
for
rpoC2
sly-u.5
for
rpoC2
vvi-u.5
for
rpoC2
ppo-u.5
for
rpoC2
mtr-u.5
for
120579890
mtr-u.5
for
rpoC2


Ortholog ID: 2056
Species zma sbi sbi osa tae bdi ath gma sly vvi ppo mtr mtr ghi ghi sot cit nta
Symbol LOC109943315 LOC8074931 rpoC2 rpoC2 LOC123081044 LOC106865719 rpoC2 rpoC2 rpoC2 rpoC2 rpoC2 LOC120579890 rpoC2 LOC121223753 rpoC2 rpoC2 rpoC2 rpoC2
Function* DNA-directed RNA polymerase subunit beta'-like DNA-directed RNA polymerase subunit beta'' RNA polymerase beta'' subunit RNA polymerase beta'' subunit DNA-directed RNA polymerase subunit beta''-like DNA-directed RNA polymerase subunit beta'' RNA polymerase beta'' subunit RNA polymerase beta'' chain RNA polymerase beta' subunit RNA polymerase beta'' chain RNA polymerase beta'' subunit DNA-directed RNA polymerase subunit beta'' RNA polymerase beta'' subunit DNA-directed RNA polymerase subunit beta''-like RNA polymerase beta'' chain RNA polymerase beta'' subunit RNA polymerase beta'' subunit RNA polymerase beta'' chain
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 9
zma03020 RNA polymerase 7
zma00195 Photosynthesis 7
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 8
sbi03010 Ribosome 5
sbi03020 RNA polymerase 4
sbi00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 8
sbi03020 RNA polymerase 5
sbi03010 Ribosome 4
sbi00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 8
osa00190 Oxidative phosphorylation 7
osa03010 Ribosome 7
osa03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 13
tae00190 Oxidative phosphorylation 8
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 4
bdi03020 RNA polymerase 3
bdi00630 Glyoxylate and dicarboxylate metabolism 2
bdi00710 Carbon fixation by Calvin cycle 2
bdi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 4
ath03020 RNA polymerase 3
ath00190 Oxidative phosphorylation 3
ath00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 8
gma00190 Oxidative phosphorylation 5
gma03020 RNA polymerase 4
gma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 8
sly03020 RNA polymerase 4
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 8
vvi00195 Photosynthesis 7
vvi03010 Ribosome 5
vvi03020 RNA polymerase 3
vvi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 8
ppo03020 RNA polymerase 5
ppo00190 Oxidative phosphorylation 4
ppo00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 7
mtr00190 Oxidative phosphorylation 4
mtr03020 RNA polymerase 4
mtr00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 7
mtr00190 Oxidative phosphorylation 4
mtr03020 RNA polymerase 4
mtr00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 3
ghi03010 Ribosome 2
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 3
ghi03020 RNA polymerase 3
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 10
sot00195 Photosynthesis 3
sot03020 RNA polymerase 3
sot00190 Oxidative phosphorylation 2
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 8
cit00195 Photosynthesis 7
cit03020 RNA polymerase 3
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 6
nta00190 Oxidative phosphorylation 5
nta03020 RNA polymerase 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 109943315 8074931 4549110 3131434 123081044 106865719 844785 3989293 3950457 4025097 4929643 120579890 5333185 121223753 3989195 4099930 4271233 800532
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