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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   rpoC2   RNA polymerase beta'' chain 
 gma-r.7   rpoC2   RNA polymerase beta'' chain 
 mtr-u.5   120579890   DNA-directed RNA polymerase subunit beta'' 
 mtr-u.5   rpoC2   RNA polymerase beta'' subunit 
 ppo-u.5   rpoC2   RNA polymerase beta'' subunit 
 ath-u.5   rpoC2   RNA polymerase beta'' subunit 
 vvi-u.5   rpoC2   RNA polymerase beta'' chain 
 ghi-r.1   121219576   DNA-directed RNA polymerase subunit beta''-like 
 ghi-r.1   rpoC2   RNA polymerase beta'' chain 
 ghi-r.1   121223753   DNA-directed RNA polymerase subunit beta''-like 
 bna-r.1   rpoC2   RNA polymerase beta'' subunit 
 cit-r.1   rpoC2   RNA polymerase beta'' subunit 
 sly-u.5   rpoC2   RNA polymerase beta' subunit 
 sot-r.1   rpoC2   RNA polymerase beta'' subunit 
 nta-r.1   rpoC2   RNA polymerase beta'' chain 
 osa-u.5   rpoC2   RNA polymerase beta'' subunit 
 zma-u.5   109943315   DNA-directed RNA polymerase subunit beta'-like 
 zma-u.5   118473634   DNA-directed RNA polymerase subunit beta'' 
 tae-r.2   123081044   DNA-directed RNA polymerase subunit beta''-like 
 sbi-r.1   rpoC2   RNA polymerase beta'' subunit 
 sbi-r.1   8074931   DNA-directed RNA polymerase subunit beta'' 
 bdi-r.1   106865719   DNA-directed RNA polymerase subunit beta'' 

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Top 50 coexpressed genes to rpoC2 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to rpoC2 (gma-u.5 coexpression data)

CoexMap"3989293"


gmarpoC2 | Entrez gene ID : 3989293    
Species gma mtr ppo ath vvi ghi bna cit sly sot nta osa zma tae sbi bdi bra hvu cre
Paralog 2 2 1 1 1 3 1 1 1 1 1 1 2 1 2 1 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03020 [list] [network] RNA polymerase (81 genes)
GO BP
GO CC
GO MF
Protein YP_538765.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  chlo 1,  nucl 1  (predict for YP_538765.1)
Subcellular
localization
TargetP
other 4,  mito 3  (predict for YP_538765.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
rpoC2
gma-r.7
for
rpoC2
mtr-u.5
for
120579890
mtr-u.5
for
rpoC2
ppo-u.5
for
rpoC2
ath-u.5
for
rpoC2
vvi-u.5
for
rpoC2
ghi-r.1
for
121219576
ghi-r.1
for
rpoC2
ghi-r.1
for
121223753
bna-r.1
for
rpoC2
cit-r.1
for
rpoC2
sly-u.5
for
rpoC2
sot-r.1
for
rpoC2
nta-r.1
for
rpoC2
osa-u.5
for
rpoC2
zma-u.5
for
109943315
zma-u.5
for
118473634
tae-r.2
for
123081044
sbi-r.1
for
rpoC2
sbi-r.1
for
8074931
bdi-r.1
for
106865719


Ortholog ID: 2056
Species gma mtr mtr ppo ath vvi ghi ghi ghi bna cit sly sot nta osa zma tae sbi sbi bdi
Symbol rpoC2 LOC120579890 rpoC2 rpoC2 rpoC2 rpoC2 LOC121219576 rpoC2 LOC121223753 rpoC2 rpoC2 rpoC2 rpoC2 rpoC2 rpoC2 LOC109943315 LOC123081044 rpoC2 LOC8074931 LOC106865719
Function* RNA polymerase beta'' chain DNA-directed RNA polymerase subunit beta'' RNA polymerase beta'' subunit RNA polymerase beta'' subunit RNA polymerase beta'' subunit RNA polymerase beta'' chain DNA-directed RNA polymerase subunit beta''-like RNA polymerase beta'' chain DNA-directed RNA polymerase subunit beta''-like RNA polymerase beta'' subunit RNA polymerase beta'' subunit RNA polymerase beta' subunit RNA polymerase beta'' subunit RNA polymerase beta'' chain RNA polymerase beta'' subunit DNA-directed RNA polymerase subunit beta'-like DNA-directed RNA polymerase subunit beta''-like RNA polymerase beta'' subunit DNA-directed RNA polymerase subunit beta'' DNA-directed RNA polymerase subunit beta''
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 8
gma00190 Oxidative phosphorylation 5
gma03020 RNA polymerase 4
gma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 7
mtr00190 Oxidative phosphorylation 4
mtr03020 RNA polymerase 4
mtr00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 7
mtr00190 Oxidative phosphorylation 4
mtr03020 RNA polymerase 4
mtr00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 8
ppo03020 RNA polymerase 5
ppo00190 Oxidative phosphorylation 4
ppo00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 4
ath03020 RNA polymerase 3
ath00190 Oxidative phosphorylation 3
ath00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 8
vvi00195 Photosynthesis 7
vvi03010 Ribosome 5
vvi03020 RNA polymerase 3
vvi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 3
ghi03010 Ribosome 2
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 3
ghi03020 RNA polymerase 3
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 3
ghi03010 Ribosome 2
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 8
cit00195 Photosynthesis 7
cit03020 RNA polymerase 3
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 8
sly03020 RNA polymerase 4
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 10
sot00195 Photosynthesis 3
sot03020 RNA polymerase 3
sot00190 Oxidative phosphorylation 2
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 6
nta00190 Oxidative phosphorylation 5
nta03020 RNA polymerase 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 8
osa00190 Oxidative phosphorylation 7
osa03010 Ribosome 7
osa03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 9
zma03020 RNA polymerase 7
zma00195 Photosynthesis 7
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 13
tae00190 Oxidative phosphorylation 8
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 8
sbi03020 RNA polymerase 5
sbi03010 Ribosome 4
sbi00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 8
sbi03010 Ribosome 5
sbi03020 RNA polymerase 4
sbi00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 4
bdi03020 RNA polymerase 3
bdi00630 Glyoxylate and dicarboxylate metabolism 2
bdi00710 Carbon fixation by Calvin cycle 2
bdi01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 3989293 120579890 5333185 4929643 844785 4025097 121219576 3989195 121223753 11542066 4271233 3950457 4099930 800532 3131434 109943315 123081044 4549110 8074931 106865719
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