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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   120579891   ATP synthase subunit alpha, chloroplastic 
 mtr-r.5   120579891   ATP synthase subunit alpha, chloroplastic 
 mtr-u.5   atpA   ATP synthase CF1 alpha subunit 
 mtr-u.5   120579887   ATP synthase subunit alpha, chloroplastic 
 gma-u.5   atpA   ATP synthase CF1 alpha subunit 
 gma-u.5   121173224   ATP synthase subunit alpha, chloroplastic-like 
 ppo-u.5   atpA   ATP synthase CF1 alpha subunit 
 ath-u.5   atpA   ATP synthase CF1 alpha subunit 
 vvi-u.5   atpA   ATPase alpha subunit 
 vvi-u.5   atpA   ATP synthase CF1 alpha subunit 
 sly-u.5   atpA   ATP synthase CF1 alpha subunit 
 osa-u.5   107279124   ATP synthase subunit alpha, chloroplastic 
 osa-u.5   atpA   ATP synthase CF1 alpha subunit 
 zma-u.5   atpA   ATP synthase CF1 alpha subunit 
 zma-u.5   118475064   ATP synthase subunit alpha, chloroplastic 
 zma-u.5   118474820   ATP synthase subunit alpha, chloroplastic 

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Top 50 coexpressed genes to 120579891 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 120579891 (mtr-u.5 coexpression data)

CoexMap"120579891"


mtrLOC120579891 | Entrez gene ID : 120579891    
Species mtr gma ppo ath vvi sly osa zma hvu bna cit bra ghi sbi bdi nta tae cre sot
Paralog 4 2 1 1 2 1 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG mtr00190 [list] [network] Oxidative phosphorylation (174 genes)
mtr00195 [list] [network] Photosynthesis (100 genes)
GO BP
GO:0015986 [list] [network] proton motive force-driven ATP synthesis  (33 genes)  IEA  
GO:1902600 [list] [network] proton transmembrane transport  (123 genes)  IEA  
GO CC
GO MF
GO:0046933 [list] [network] proton-transporting ATP synthase activity, rotational mechanism  (22 genes)  IEA  
GO:0043531 [list] [network] ADP binding  (662 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2502 genes)  IEA  
Protein XP_039688568.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 3  (predict for XP_039688568.1)
Subcellular
localization
TargetP
other 8  (predict for XP_039688568.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
120579891
mtr-r.5
for
120579891
mtr-u.5
for
atpA
mtr-u.5
for
120579887
gma-u.5
for
atpA
gma-u.5
for
121173224
ppo-u.5
for
atpA
ath-u.5
for
atpA
vvi-u.5
for
atpA
vvi-u.5
for
atpA
sly-u.5
for
atpA
osa-u.5
for
107279124
osa-u.5
for
atpA
zma-u.5
for
atpA
zma-u.5
for
118475064
zma-u.5
for
118474820


Ortholog ID: 2187
Species mtr mtr gma gma ppo ath bra vvi ghi ghi bna cit sly sot nta osa osa zma zma tae tae hvu hvu sbi bdi bdi
Symbol LOC120579887 LOC120579891 atpA LOC121173224 atpA atpA LOC117126232 atpA LOC121209965 atpA atpA atpA atpA atpA atpA LOC107279124 atpA LOC118475064 LOC118474820 LOC123067393 LOC123104770 LOC123419404 LOC123421964 atpA atpA LOC100828258
Function* ATP synthase subunit alpha, chloroplastic ATP synthase subunit alpha, chloroplastic ATP synthase CF1 alpha subunit ATP synthase subunit alpha, chloroplastic-like ATP synthase CF1 alpha subunit ATP synthase CF1 alpha subunit ATP synthase subunit alpha, chloroplastic ATP synthase CF1 alpha subunit ATP synthase subunit alpha, chloroplastic-like ATP synthase CF1 alpha subunit ATP synthase CF1 alpha subunit ATP synthase CF1 alpha subunit ATP synthase CF1 alpha subunit ATP synthase CF1 alpha subunit ATP synthase CF1 alpha chain ATP synthase subunit alpha, chloroplastic ATP synthase CF1 alpha subunit ATP synthase subunit alpha, chloroplastic ATP synthase subunit alpha, chloroplastic ATP synthase subunit alpha, chloroplastic-like ATP synthase subunit alpha, chloroplastic ATP synthase subunit alpha, chloroplastic ATP synthase subunit alpha, chloroplastic ATP synthase CF1 alpha subunit ATP synthase CF1 alpha subunit ATP synthase subunit alpha, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 8
mtr00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 8
mtr00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 12
gma00195 Photosynthesis 7
gma03020 RNA polymerase 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 10
gma00195 Photosynthesis 8
gma03020 RNA polymerase 3
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 9
ppo00190 Oxidative phosphorylation 6
ppo03010 Ribosome 5
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 14
ath00190 Oxidative phosphorylation 4
ath01200 Carbon metabolism 2
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 7
bra00190 Oxidative phosphorylation 3
bra03020 RNA polymerase 2
bra00630 Glyoxylate and dicarboxylate metabolism 2
bra00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 13
vvi00195 Photosynthesis 7
vvi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 7
ghi00195 Photosynthesis 7
ghi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 9
ghi00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 11
cit00190 Oxidative phosphorylation 6
cit01200 Carbon metabolism 3
cit00970 Aminoacyl-tRNA biosynthesis 2
cit00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 8
sly00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 11
sot00190 Oxidative phosphorylation 3
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 9
nta00195 Photosynthesis 7
nta03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 10
osa00190 Oxidative phosphorylation 9
osa03010 Ribosome 6
osa03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 10
osa00190 Oxidative phosphorylation 5
osa00195 Photosynthesis 4
osa03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 11
zma00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 9
zma00195 Photosynthesis 8
zma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 13
tae00195 Photosynthesis 13
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 13
tae00195 Photosynthesis 13
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00630 Glyoxylate and dicarboxylate metabolism 12
hvu00710 Carbon fixation by Calvin cycle 12
hvu01200 Carbon metabolism 12
hvu00190 Oxidative phosphorylation 9
hvu00195 Photosynthesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 21
hvu00195 Photosynthesis 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 8
sbi00195 Photosynthesis 7
sbi03020 RNA polymerase 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 8
bdi00190 Oxidative phosphorylation 5
bdi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 8
bdi00195 Photosynthesis 7
bdi00630 Glyoxylate and dicarboxylate metabolism 2
bdi00710 Carbon fixation by Calvin cycle 2
bdi01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 120579887 120579891 3989298 121173224 4929638 844790 117126232 4025114 121209965 3989190 11542086 4271228 3950425 4099854 800492 107279124 3131390 118475064 118474820 123067393 123104770 123419404 123421964 4549115 6439769 100828258
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