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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   atpA   ATP synthase CF1 alpha subunit 
 zma-u.5   118474820   ATP synthase subunit alpha, chloroplastic 
 zma-u.5   118475064   ATP synthase subunit alpha, chloroplastic 
 zma-u.5   118475932   ATP synthase subunit alpha, chloroplastic 
 osa-u.5   107279124   ATP synthase subunit alpha, chloroplastic 
 osa-u.5   atpA   ATP synthase CF1 alpha subunit 
 ath-u.5   atpA   ATP synthase CF1 alpha subunit 
 gma-u.5   atpA   ATP synthase CF1 alpha subunit 
 gma-u.5   121173224   ATP synthase subunit alpha, chloroplastic-like 
 sly-u.5   atpA   ATP synthase CF1 alpha subunit 
 vvi-u.5   atpA   ATPase alpha subunit 
 ppo-u.5   atpA   ATP synthase CF1 alpha subunit 
 mtr-u.5   120579891   ATP synthase subunit alpha, chloroplastic 
 mtr-u.5   120579887   ATP synthase subunit alpha, chloroplastic 
 mtr-u.5   atpA   ATP synthase CF1 alpha subunit 

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Top 50 coexpressed genes to atpA (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to atpA (sbi-r.1 coexpression data)

CoexMap"4549115"


sbiatpA | Entrez gene ID : 4549115    
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 3 2 1 2 1 1 1 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi00190 [list] [network] Oxidative phosphorylation (151 genes)
sbi00195 [list] [network] Photosynthesis (76 genes)
GO BP
GO CC
GO MF
Protein YP_899404.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  chlo 1,  mito 1,  chlo_mito 1  (predict for YP_899404.1)
Subcellular
localization
TargetP
other 8  (predict for YP_899404.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
atpA

.
zma-u.5
for
118474820

.
zma-u.5
for
118475064

.
zma-u.5
for
118475932

.
osa-u.5
for
107279124

.
osa-u.5
for
atpA

.
ath-u.5
for
atpA

.
gma-u.5
for
atpA

.
gma-u.5
for
121173224

.
sly-u.5
for
atpA

.
vvi-u.5
for
atpA

.
ppo-u.5
for
atpA

.
mtr-u.5
for
120579891

.
mtr-u.5
for
120579887

.
mtr-u.5
for
atpA

.


Ortholog ID: 2187
Species ath gma gma sly osa osa zma zma bra vvi ppo mtr mtr tae tae hvu hvu ghi ghi bna sbi sot cit bdi bdi nta
Symbol atpA atpA LOC121173224 atpA LOC107279124 atpA LOC118475064 LOC118474820 LOC117126232 atpA atpA LOC120579887 LOC120579891 LOC123067393 LOC123104770 LOC123419404 LOC123421964 LOC121209965 atpA atpA atpA atpA atpA atpA LOC100828258 atpA
Function* ATP synthase CF1 alpha subunit ATP synthase CF1 alpha subunit ATP synthase subunit alpha, chloroplastic-like ATP synthase CF1 alpha subunit ATP synthase subunit alpha, chloroplastic ATP synthase CF1 alpha subunit ATP synthase subunit alpha, chloroplastic ATP synthase subunit alpha, chloroplastic ATP synthase subunit alpha, chloroplastic ATP synthase CF1 alpha subunit ATP synthase CF1 alpha subunit ATP synthase subunit alpha, chloroplastic ATP synthase subunit alpha, chloroplastic ATP synthase subunit alpha, chloroplastic-like ATP synthase subunit alpha, chloroplastic ATP synthase subunit alpha, chloroplastic ATP synthase subunit alpha, chloroplastic ATP synthase subunit alpha, chloroplastic-like ATP synthase CF1 alpha subunit ATP synthase CF1 alpha subunit ATP synthase CF1 alpha subunit ATP synthase CF1 alpha subunit ATP synthase CF1 alpha subunit ATP synthase CF1 alpha subunit ATP synthase subunit alpha, chloroplastic ATP synthase CF1 alpha chain
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 14
ath00190 Oxidative phosphorylation 4
ath01200 Carbon metabolism 2
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 12
gma00195 Photosynthesis 7
gma03020 RNA polymerase 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 10
gma00195 Photosynthesis 8
gma03020 RNA polymerase 3
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 8
sly00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 10
osa00190 Oxidative phosphorylation 9
osa03010 Ribosome 6
osa03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 10
osa00190 Oxidative phosphorylation 5
osa00195 Photosynthesis 4
osa03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 11
zma00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 9
zma00195 Photosynthesis 8
zma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 7
bra00190 Oxidative phosphorylation 3
bra03020 RNA polymerase 2
bra00630 Glyoxylate and dicarboxylate metabolism 2
bra00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 13
vvi00195 Photosynthesis 7
vvi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 9
ppo00190 Oxidative phosphorylation 6
ppo03010 Ribosome 5
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 8
mtr00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 8
mtr00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 13
tae00195 Photosynthesis 13
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 13
tae00195 Photosynthesis 13
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00630 Glyoxylate and dicarboxylate metabolism 12
hvu00710 Carbon fixation by Calvin cycle 12
hvu01200 Carbon metabolism 12
hvu00190 Oxidative phosphorylation 9
hvu00195 Photosynthesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 21
hvu00195 Photosynthesis 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 7
ghi00195 Photosynthesis 7
ghi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 9
ghi00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 8
sbi00195 Photosynthesis 7
sbi03020 RNA polymerase 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 11
sot00190 Oxidative phosphorylation 3
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 11
cit00190 Oxidative phosphorylation 6
cit01200 Carbon metabolism 3
cit00970 Aminoacyl-tRNA biosynthesis 2
cit00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 8
bdi00190 Oxidative phosphorylation 5
bdi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 8
bdi00195 Photosynthesis 7
bdi00630 Glyoxylate and dicarboxylate metabolism 2
bdi00710 Carbon fixation by Calvin cycle 2
bdi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 9
nta00195 Photosynthesis 7
nta03010 Ribosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844790 3989298 121173224 3950425 107279124 3131390 118475064 118474820 117126232 4025114 4929638 120579887 120579891 123067393 123104770 123419404 123421964 121209965 3989190 11542086 4549115 4099854 4271228 6439769 100828258 800492
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