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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   121173310   polyubiquitin 
 gma-r.7   121173310   polyubiquitin 
 gma-u.5   100817214   polyubiquitin 
 gma-u.5   100815545   polyubiquitin 3 
 gma-u.5   100800638   polyubiquitin 11 
 mtr-u.5   25493109   polyubiquitin-A-like 
 mtr-u.5   11434120   polyubiquitin 
 mtr-u.5   25502891   polyubiquitin 11 
 ppo-u.5   7485436   polyubiquitin 11 
 ppo-u.5   7480065   polyubiquitin 
 ppo-u.5   18106588   polyubiquitin 
 ath-u.5   UBQ13   ubiquitin 13 
 vvi-u.5   100267431   polyubiquitin 
 vvi-u.5   100252768   polyubiquitin 4 
 sly-u.5   ubq1-1   ubiquitin 
 sly-u.5   101258282   polyubiquitin 
 sly-u.5   101256039   polyubiquitin 
 osa-u.5   9272016   polyubiquitin 
 osa-u.5   4328390   polyubiquitin 
 osa-u.5   4341860   polyubiquitin 
 zma-u.5   542322   polyubiquitin 
 zma-u.5   103626648   polyubiquitin 
 zma-u.5   100282068   uncharacterized LOC100282068 

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Top 50 coexpressed genes to 121173310 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 121173310 (gma-u.5 coexpression data)

CoexMap"121173310"


gmaLOC121173310 | Entrez gene ID : 121173310    
Species gma mtr ppo ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 5 3 3 1 2 3 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx04120 [list] [network] Ubiquitin mediated proteolysis (237 genes)
GO BP
GO:0019941 [list] [network] modification-dependent protein catabolic process  (505 genes)  IEA  
GO:0016567 [list] [network] protein ubiquitination  (610 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (9233 genes)  IEA  
GO MF
GO:0031386 [list] [network] protein tag activity  (32 genes)  IEA  
GO:0031625 [list] [network] ubiquitin protein ligase binding  (58 genes)  IEA  
Protein XP_040864125.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  cyto_nucl 5,  chlo 1,  nucl 1  (predict for XP_040864125.1)
Subcellular
localization
TargetP
other 8  (predict for XP_040864125.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
121173310

.
gma-r.7
for
121173310

.
gma-u.5
for
100817214

.
gma-u.5
for
100815545

.
gma-u.5
for
100800638

.
mtr-u.5
for
25493109

.
mtr-u.5
for
11434120

.
mtr-u.5
for
25502891

.
ppo-u.5
for
7485436

.
ppo-u.5
for
7480065

.
ppo-u.5
for
18106588

.
ath-u.5
for
UBQ13

.
vvi-u.5
for
100267431

.
vvi-u.5
for
100252768

.
sly-u.5
for
ubq1-1

.
sly-u.5
for
101258282

.
sly-u.5
for
101256039

.
osa-u.5
for
9272016

.
osa-u.5
for
4328390

.
osa-u.5
for
4341860

.
zma-u.5
for
542322

.
zma-u.5
for
103626648

.
zma-u.5
for
100282068

.


Ortholog ID: 257
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol UBQ10 UBQ13 LOC100791065 SUBI-2 LOC101258282 ubq1-1 LOC4341860 LOC4337080 LOC542322 LOC103626648 LOC103839752 LOC103839755 LOC100259635 LOC100252768 LOC7480065 LOC18095912 LOC11421243 LOC25501783 LOC123143944 LOC123143945 LOC123406377 LOC123401278 LOC107899654 LOC107919923 LOC106369026 LOC106372626 CHLRE_11g467567v5 LOC110430987 LOC8063786 LOC102587932 LOC102599865 LOC102629380 LOC102622806 LOC100831055 LOC104585556 LOC107782949 LOC107788853
Function* polyubiquitin 10 ubiquitin 13 polyubiquitin polyubiquitin polyubiquitin ubiquitin polyubiquitin polyubiquitin 3-like polyubiquitin polyubiquitin polyubiquitin 11 polyubiquitin uncharacterized LOC100259635 polyubiquitin 4 polyubiquitin polyubiquitin polyubiquitin polyubiquitin 4 polyubiquitin polyubiquitin 11 polyubiquitin polyubiquitin polyubiquitin polyubiquitin polyubiquitin polyubiquitin uncharacterized protein polyubiquitin polyubiquitin polyubiquitin polyubiquitin polyubiquitin polyubiquitin-like polyubiquitin polyubiquitin polyubiquitin polyubiquitin
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 3
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
gma03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 6
gma04141 Protein processing in endoplasmic reticulum 4
gma03040 Spliceosome 3
gma04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
sly04120 Ubiquitin mediated proteolysis 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04130 SNARE interactions in vesicular transport 2
sly04120 Ubiquitin mediated proteolysis 2
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 3
osa04120 Ubiquitin mediated proteolysis 3
osa03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00250 Alanine, aspartate and glutamate metabolism 2
osa00520 Amino sugar and nucleotide sugar metabolism 2
osa01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 4
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 4
vvi04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
ppo00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 7
hvu00940 Phenylpropanoid biosynthesis 3
hvu00250 Alanine, aspartate and glutamate metabolism 2
hvu00460 Cyanoamino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 8
hvu00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 5
ghi00071 Fatty acid degradation 2
ghi00280 Valine, leucine and isoleucine degradation 2
ghi00310 Lysine degradation 2
ghi00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 5
bna00270 Cysteine and methionine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 4
cre04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 5
sbi00030 Pentose phosphate pathway 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 9
bdi03010 Ribosome 3
bdi03083 Polycomb repressive complex 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825880 842845 100791065 114515510 101258282 101267758 4341860 4337080 542322 103626648 103839752 103839755 100259635 100252768 7480065 18095912 11421243 25501783 123143944 123143945 123406377 123401278 107899654 107919923 106369026 106372626 5726921 110430987 8063786 102587932 102599865 102629380 102622806 100831055 104585556 107782949 107788853
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