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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   121205083   pentatricopeptide repeat-containing protein At5g57250, mitochondrial-like 
 ath-u.5   AT5G57250   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100783405   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 
 vvi-u.5   100266493   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 
 ppo-u.5   18107833   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 
 mtr-u.5   11444894   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 
 sly-u.5   101244188   pentatricopeptide repeat-containing protein 
 zma-u.5   103649988   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 

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Top 50 coexpressed genes to 121205083 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 121205083 (ghi-r.1 coexpression data)

CoexMap"121205083"


ghiLOC121205083 | Entrez gene ID : 121205083    
Species ghi ath gma vvi ppo mtr sly zma sbi nta bra osa cre cit hvu bdi sot tae bna
Paralog 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_040931945.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  extr 2,  cyto_pero 2,  cyto_plas 2  (predict for XP_040931945.1)
Subcellular
localization
TargetP
other 9  (predict for XP_040931945.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
121205083

.
ath-u.5
for
AT5G57250

.
gma-u.5
for
100783405

.
vvi-u.5
for
100266493

.
ppo-u.5
for
18107833

.
mtr-u.5
for
11444894

.
sly-u.5
for
101244188

.
zma-u.5
for
103649988

.


Ortholog ID: 6447
Species ath gma sly zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT5G57250 LOC100783405 LOC101244188 LOC103649988 LOC103845163 LOC100266493 LOC18107833 LOC11444894 LOC123061028 LOC123069616 LOC123443451 LOC107926292 LOC107962935 LOC106401077 LOC111212944 LOC8085827 LOC102585306 LOC102624866 LOC100846389 LOC107785341 LOC107832733
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial-like pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial-like pentatricopeptide repeat-containing protein At5g57250, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 4
mtr03040 Spliceosome 3
mtr03082 ATP-dependent chromatin remodeling 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03440 Homologous recombination 3
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00561 Glycerolipid metabolism 2
nta00310 Lysine degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5008310 100783405 101244188 103649988 103845163 100266493 18107833 11444894 123061028 123069616 123443451 107926292 107962935 106401077 111212944 8085827 102585306 102624866 100846389 107785341 107832733
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