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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   121206089   nuclear pore complex protein NUP107 
 ghi-r.1   107891730   nuclear pore complex protein NUP107 
 ath-u.5   AT3G14120   nuclear pore complex protein 
 bra-r.6   103870063   nuclear pore complex protein NUP107 
 bra-r.6   103842278   nuclear pore complex protein NUP107 
 bna-r.1   106377565   nuclear pore complex protein NUP107 
 bna-r.1   106452245   nuclear pore complex protein NUP107 
 bna-r.1   111197761   nuclear pore complex protein NUP107 
 cit-r.1   102613792   nuclear pore complex protein NUP107 
 gma-u.5   102660515   nuclear pore complex protein NUP107 
 gma-u.5   100786552   nuclear pore complex protein NUP107 
 vvi-u.5   100242984   nuclear pore complex protein NUP107 
 ppo-u.5   18094702   nuclear pore complex protein NUP107 
 mtr-u.5   11418924   nuclear pore complex protein NUP107 
 sly-u.5   101260210   nuclear pore complex protein NUP107 
 sot-r.1   102584469   nuclear pore complex protein NUP107 
 nta-r.1   107769618   nuclear pore complex protein NUP107 
 nta-r.1   107762287   nuclear pore complex protein NUP107 
 osa-u.5   4351012   nuclear pore complex protein NUP107 
 zma-u.5   100272594   uncharacterized LOC100272594 
 tae-r.2   123188055   nuclear pore complex protein NUP107 
 tae-r.2   123180109   nuclear pore complex protein NUP107 
 tae-r.2   123106397   nuclear pore complex protein NUP107 
 hvu-r.1   123396434   nuclear pore complex protein NUP107 
 sbi-r.1   8068347   nuclear pore complex protein NUP107 
 bdi-r.1   100840966   nuclear pore complex protein NUP107 
 cre-r.1   CHLRE_10g425675v5   uncharacterized protein 

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Top 50 coexpressed genes to 121206089 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 121206089 (ghi-r.1 coexpression data)

CoexMap"121206089"


ghiLOC121206089 | Entrez gene ID : 121206089    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 2 3 1 2 1 1 1 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03013 [list] [network] Nucleocytoplasmic transport (289 genes)
GO BP
GO:0000973 [list] [network] post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery  (13 genes)  IEA  
GO:0006406 [list] [network] mRNA export from nucleus  (78 genes)  IEA  
GO:0006606 [list] [network] protein import into nucleus  (140 genes)  IEA  
GO CC
GO:0031080 [list] [network] nuclear pore outer ring  (13 genes)  IEA  
GO:0005643 [list] [network] nuclear pore  (101 genes)  IEA  
GO MF
GO:0017056 [list] [network] structural constituent of nuclear pore  (43 genes)  IEA  
Protein XP_040932261.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 1,  chlo 1,  vacu 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_040932261.1)
Subcellular
localization
TargetP
other 8  (predict for XP_040932261.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
121206089
ghi-r.1
for
107891730
ath-u.5
for
AT3G14120
bra-r.6
for
103870063
bra-r.6
for
103842278
bna-r.1
for
106377565
bna-r.1
for
106452245
bna-r.1
for
111197761
cit-r.1
for
102613792
gma-u.5
for
102660515
gma-u.5
for
100786552
vvi-u.5
for
100242984
ppo-u.5
for
18094702
mtr-u.5
for
11418924
sly-u.5
for
101260210
sot-r.1
for
102584469
nta-r.1
for
107769618
nta-r.1
for
107762287
osa-u.5
for
4351012
zma-u.5
for
100272594
tae-r.2
for
123188055
tae-r.2
for
123180109
tae-r.2
for
123106397
hvu-r.1
for
123396434
sbi-r.1
for
8068347
bdi-r.1
for
100840966
cre-r.1
for
CHLRE_10g425675v5


Ortholog ID: 8457
Species ghi ghi ath bra bra bna bna bna cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC121206089 LOC107891730 AT3G14120 LOC103870063 LOC103842278 LOC106377565 LOC106452245 LOC111197761 LOC102613792 LOC102660515 LOC100786552 LOC100242984 LOC18094702 LOC11418924 LOC101260210 LOC102584469 LOC107769618 LOC107762287 LOC4351012 LOC100272594 LOC123188055 LOC123180109 LOC123106397 LOC123396434 LOC8068347 LOC100840966 CHLRE_10g425675v5
Function* nuclear pore complex protein NUP107 nuclear pore complex protein NUP107 nuclear pore complex protein nuclear pore complex protein NUP107 nuclear pore complex protein NUP107 nuclear pore complex protein NUP107 nuclear pore complex protein NUP107 nuclear pore complex protein NUP107 nuclear pore complex protein NUP107 nuclear pore complex protein NUP107 nuclear pore complex protein NUP107 nuclear pore complex protein NUP107 nuclear pore complex protein NUP107 nuclear pore complex protein NUP107 nuclear pore complex protein NUP107 nuclear pore complex protein NUP107 nuclear pore complex protein NUP107 nuclear pore complex protein NUP107 nuclear pore complex protein NUP107 uncharacterized LOC100272594 nuclear pore complex protein NUP107 nuclear pore complex protein NUP107 nuclear pore complex protein NUP107 nuclear pore complex protein NUP107 nuclear pore complex protein NUP107 nuclear pore complex protein NUP107 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi04142 Lysosome 2
ghi04144 Endocytosis 2
ghi05100 Bacterial invasion of epithelial cells 2
ghi00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 6
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 7
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 6
bra03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 6
bra03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna03015 mRNA surveillance pathway 4
bna03440 Homologous recombination 2
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna03440 Homologous recombination 2
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna03440 Homologous recombination 2
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 4
gma03013 Nucleocytoplasmic transport 4
gma03015 mRNA surveillance pathway 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 3
ppo04120 Ubiquitin mediated proteolysis 2
ppo00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 6
mtr03040 Spliceosome 3
mtr03020 RNA polymerase 2
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 6
sly03020 RNA polymerase 3
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 7
sot03018 RNA degradation 3
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae03013 Nucleocytoplasmic transport 3
tae03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 5
hvu03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
sbi03013 Nucleocytoplasmic transport 2
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 5
bdi03040 Spliceosome 3
bdi03018 RNA degradation 2
bdi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 5
cre00780 Biotin metabolism 2
cre01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 121206089 107891730 820629 103870063 103842278 106377565 106452245 111197761 102613792 102660515 100786552 100242984 18094702 11418924 101260210 102584469 107769618 107762287 4351012 100272594 123188055 123180109 123106397 123396434 8068347 100840966 66054969
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