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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18094702   nuclear pore complex protein NUP107 
 ppo-r.4   18094702   nuclear pore complex protein NUP107 
 gma-u.5   102660515   nuclear pore complex protein NUP107 
 gma-u.5   100786552   nuclear pore complex protein NUP107 
 mtr-u.5   11418924   nuclear pore complex protein NUP107 
 ath-u.5   AT3G14120   nuclear pore complex protein 
 vvi-u.5   100242984   nuclear pore complex protein NUP107 
 sly-u.5   101260210   nuclear pore complex protein NUP107 
 osa-u.5   4351012   nuclear pore complex protein NUP107 
 zma-u.5   100272594   uncharacterized LOC100272594 

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Top 50 coexpressed genes to 18094702 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18094702 (ppo-u.5 coexpression data)

CoexMap"18094702"


ppoLOC18094702 | Entrez gene ID : 18094702    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03013 [list] [network] Nucleocytoplasmic transport (142 genes)
GO BP
GO:0000973 [list] [network] post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery  (4 genes)  IEA  
GO:0006406 [list] [network] mRNA export from nucleus  (39 genes)  IEA  
GO:0006606 [list] [network] protein import into nucleus  (66 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1948 genes)  IEA  
GO CC
GO:0031080 [list] [network] nuclear pore outer ring  (7 genes)  IEA  
GO:0005643 [list] [network] nuclear pore  (51 genes)  IEA  
GO MF
GO:0017056 [list] [network] structural constituent of nuclear pore  (21 genes)  IEA  
Protein XP_024444211.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 3,  cyto_pero 3,  cyto_E.R. 3,  cyto_plas 3  (predict for XP_024444211.1)
Subcellular
localization
TargetP
other 9  (predict for XP_024444211.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18094702

.
ppo-r.4
for
18094702

.
gma-u.5
for
102660515

.
gma-u.5
for
100786552

.
mtr-u.5
for
11418924

.
ath-u.5
for
AT3G14120

.
vvi-u.5
for
100242984

.
sly-u.5
for
101260210

.
osa-u.5
for
4351012

.
zma-u.5
for
100272594

.


Ortholog ID: 8457
Species ath gma gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT3G14120 LOC100786552 LOC102660515 LOC101260210 LOC4351012 LOC100272594 LOC103870063 LOC103842278 LOC100242984 LOC18094702 LOC11418924 LOC123180109 LOC123188055 LOC123396434 LOC107891730 LOC121206089 LOC106452245 LOC111197761 CHLRE_10g425675v5 LOC8068347 LOC102584469 LOC102613792 LOC100840966 LOC107769618 LOC107762287
Function* nuclear pore complex protein nuclear pore complex protein NUP107 nuclear pore complex protein NUP107 nuclear pore complex protein NUP107 nuclear pore complex protein NUP107 uncharacterized LOC100272594 nuclear pore complex protein NUP107 nuclear pore complex protein NUP107 nuclear pore complex protein NUP107 nuclear pore complex protein NUP107 nuclear pore complex protein NUP107 nuclear pore complex protein NUP107 nuclear pore complex protein NUP107 nuclear pore complex protein NUP107 nuclear pore complex protein NUP107 nuclear pore complex protein NUP107 nuclear pore complex protein NUP107 nuclear pore complex protein NUP107 uncharacterized protein nuclear pore complex protein NUP107 nuclear pore complex protein NUP107 nuclear pore complex protein NUP107 nuclear pore complex protein NUP107 nuclear pore complex protein NUP107 nuclear pore complex protein NUP107
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 7
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 4
gma03013 Nucleocytoplasmic transport 4
gma03015 mRNA surveillance pathway 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 6
sly03020 RNA polymerase 3
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 6
bra03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 6
bra03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 3
ppo04120 Ubiquitin mediated proteolysis 2
ppo00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 6
mtr03040 Spliceosome 3
mtr03020 RNA polymerase 2
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae03013 Nucleocytoplasmic transport 3
tae03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 5
hvu03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 6
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi04142 Lysosome 2
ghi04144 Endocytosis 2
ghi05100 Bacterial invasion of epithelial cells 2
ghi00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna03440 Homologous recombination 2
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna03440 Homologous recombination 2
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 5
cre00780 Biotin metabolism 2
cre01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
sbi03013 Nucleocytoplasmic transport 2
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 7
sot03018 RNA degradation 3
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 5
bdi03040 Spliceosome 3
bdi03018 RNA degradation 2
bdi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820629 100786552 102660515 101260210 4351012 100272594 103870063 103842278 100242984 18094702 11418924 123180109 123188055 123396434 107891730 121206089 106452245 111197761 66054969 8068347 102584469 102613792 100840966 107769618 107762287
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