ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	121216239	uncharacterized LOC121216239
ghi-r.1	107927578	uncharacterized LOC107927578
cit-r.1	102611744	uncharacterized LOC102611744
gma-u.5	100787224	uncharacterized LOC100787224
gma-u.5	100786623	uncharacterized LOC100786623
vvi-u.5	100267656	uncharacterized LOC100267656
ppo-u.5	7490910	uncharacterized LOC7490910
ppo-u.5	18102772	uncharacterized LOC18102772
mtr-u.5	25485827	uncharacterized LOC25485827
sly-u.5	101248162	uncharacterized LOC101248162
sot-r.1	102585114	uncharacterized LOC102585114
nta-r.1	107791209	uncharacterized LOC107791209
nta-r.1	107794198	uncharacterized LOC107794198

functional annotation

KEGG

GO BP

GO:0031047 [list] [network] regulatory ncRNA-mediated gene silencing

(146 genes)

IEA

GO CC

GO MF

Protein

XP_040947629.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 7, chlo 1, cyto 1, plas 1, chlo_mito 1, cyto_plas 1

(predict for XP_040947629.1)

Subcellular
localization
TargetP

mito 3

(predict for XP_040947629.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 121216239	ghi-r.1 for 107927578	cit-r.1 for 102611744	gma-u.5 for 100787224	gma-u.5 for 100786623	vvi-u.5 for 100267656	ppo-u.5 for 7490910	ppo-u.5 for 18102772	mtr-u.5 for 25485827	sly-u.5 for 101248162	sot-r.1 for 102585114	nta-r.1 for 107791209	nta-r.1 for 107794198

Ortholog ID: 14221

Species

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

Symbol

Function^*

uncharacterized LOC121216239

uncharacterized LOC107927578

uncharacterized LOC102611744

uncharacterized LOC100787224

uncharacterized LOC100786623

uncharacterized LOC100267656

uncharacterized LOC7490910

uncharacterized LOC18102772

uncharacterized LOC25485827

uncharacterized LOC101248162

uncharacterized LOC102585114

uncharacterized LOC107791209

uncharacterized LOC107794198

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03082	ATP-dependent chromatin remodeling	3
ghi00040	Pentose and glucuronate interconversions	2
ghi03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03082	ATP-dependent chromatin remodeling	4
ghi03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	5
cit03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00310	Lysine degradation	4
gma04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03013	Nucleocytoplasmic transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	2
mtr00562	Inositol phosphate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03410	Base excision repair	2
sot03430	Mismatch repair	2

Expression

Expression pattern

Entrez Gene ID^*

121216239

107927578

102611744

100787224

100786623

100267656

7490910

18102772

25485827

101248162

102585114

107791209

107794198


Species	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	bdi	bra	tae	ath	zma	hvu	sbi	cre	bna
Paralog	2	1	2	1	2	1	1	1	2	0	0	0	0	0	0	0	0	0	0

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 121216239 (ghi-r.1 coexpression data)

Top 50 enrichment test to 121216239 (ghi-r.1 coexpression data)

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 121216239 (ghi-r.1 coexpression data)

Top 50 enrichment test to 121216239 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**