ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	7490910	uncharacterized LOC7490910
ppo-r.4	7490910	uncharacterized LOC7490910
ppo-u.5	18102772	uncharacterized LOC18102772
gma-u.5	100786623	uncharacterized LOC100786623
gma-u.5	100787224	uncharacterized LOC100787224
mtr-u.5	25485827	uncharacterized LOC25485827
vvi-u.5	100267656	uncharacterized LOC100267656
sly-u.5	101248162	uncharacterized LOC101248162

functional annotation

KEGG

GO BP

GO:0031047 [list] [network] regulatory ncRNA-mediated gene silencing

(66 genes)

IEA

GO CC

GO MF

Protein

XP_024462208.2 [sequence] [blastp]
XP_024462209.2 [sequence] [blastp]
XP_024462210.2 [sequence] [blastp]
XP_052310850.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 7, pero 1, vacu 1, cysk 1, cyto_pero 1	(predict for XP_024462208.2)
nucl 7, pero 1, vacu 1, cysk 1, cyto_pero 1	(predict for XP_024462209.2)
nucl 6, cyto 3, cysk_nucl 3, nucl_plas 3	(predict for XP_024462210.2)
nucl 7, pero 1, vacu 1, cysk 1, cyto_pero 1	(predict for XP_052310850.1)

Subcellular
localization
TargetP

chlo 5, mito 3	(predict for XP_024462208.2)
chlo 5, mito 3	(predict for XP_024462209.2)
other 8	(predict for XP_024462210.2)
chlo 5, mito 3	(predict for XP_052310850.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7490910	ppo-r.4 for 7490910	ppo-u.5 for 18102772	gma-u.5 for 100786623	gma-u.5 for 100787224	mtr-u.5 for 25485827	vvi-u.5 for 100267656	sly-u.5 for 101248162

Ortholog ID: 14221

Species

ppo

gma

mtr

vvi

ghi

cit

sly

sot

nta

Symbol

Function^*

uncharacterized LOC7490910

uncharacterized LOC18102772

uncharacterized LOC100787224

uncharacterized LOC100786623

uncharacterized LOC25485827

uncharacterized LOC100267656

uncharacterized LOC107927578

uncharacterized LOC121216239

uncharacterized LOC102611744

uncharacterized LOC101248162

uncharacterized LOC102585114

uncharacterized LOC107794198

uncharacterized LOC107791209

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03013	Nucleocytoplasmic transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00310	Lysine degradation	4
gma04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	2
mtr00562	Inositol phosphate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03082	ATP-dependent chromatin remodeling	4
ghi03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03082	ATP-dependent chromatin remodeling	3
ghi00040	Pentose and glucuronate interconversions	2
ghi03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	5
cit03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03410	Base excision repair	2
sot03430	Mismatch repair	2

Expression

Expression pattern

Entrez Gene ID^*

7490910

18102772

100787224

100786623

25485827

100267656

107927578

121216239

102611744

101248162

102585114

107794198

107791209


Species	ppo	gma	mtr	vvi	sly	bdi	hvu	bra	cit	bna	ath	sbi	ghi	osa	sot	nta	cre	tae	zma
Paralog	3	2	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7490910 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7490910 (ppo-u.5 coexpression data)

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7490910 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7490910 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**