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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   121229291   30S ribosomal protein S2, chloroplastic 
 ath-u.5   rps2   ribosomal protein S2 
 gma-u.5   rps2   30S ribosomal protein S2 
 vvi-u.5   rps2   30S ribosomal protein S2 
 ppo-u.5   rps2   ribosomal protein S2 
 mtr-u.5   116656607   uS2 ribosome protein 
 mtr-u.5   rps2   ribosomal protein S2 
 sly-u.5   rps2   ribosomal protein S2 
 osa-u.5   rps2   ribosomal protein S2 
 zma-u.5   rps2   ribosomal protein S2 

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Top 50 coexpressed genes to 121229291 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 121229291 (ghi-r.1 coexpression data)

CoexMap"121229291"


ghiLOC121229291 | Entrez gene ID : 121229291    
Species ghi ath gma vvi ppo mtr sly osa zma hvu bna cit bra sbi bdi nta tae cre sot
Paralog 1 1 1 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03010 [list] [network] Ribosome (2429 genes)
GO BP
GO:0006412 [list] [network] translation  (1487 genes)  IEA  
GO CC
GO:0005763 [list] [network] mitochondrial small ribosomal subunit  (20 genes)  IEA  
GO:0005840 [list] [network] ribosome  (1110 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (1075 genes)  IEA  
Protein XP_040969107.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  mito 2,  nucl 1,  plas 1,  pero 1,  nucl_plas 1  (predict for XP_040969107.1)
Subcellular
localization
TargetP
other 5,  mito 4  (predict for XP_040969107.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
121229291
ath-u.5
for
rps2
gma-u.5
for
rps2
vvi-u.5
for
rps2
ppo-u.5
for
rps2
mtr-u.5
for
116656607
mtr-u.5
for
rps2
sly-u.5
for
rps2
osa-u.5
for
rps2
zma-u.5
for
rps2


Ortholog ID: 11535
Species ghi ghi ath cit gma vvi ppo mtr mtr sly sot nta osa zma sbi bdi
Symbol rps2 LOC121229291 rps2 rps2 rps2 rps2 rps2 rps2 LOC116656607 rps2 rps2 rps2 rps2 rps2 rps2 rps2
Function* 30S ribosomal protein S2 30S ribosomal protein S2, chloroplastic ribosomal protein S2 ribosomal protein S2 30S ribosomal protein S2 30S ribosomal protein S2 ribosomal protein S2 ribosomal protein S2 uS2 ribosome protein ribosomal protein S2 ribosomal protein S2 30S ribosomal protein S2 ribosomal protein S2 ribosomal protein S2 ribosomal protein S2 ribosomal protein S2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 6
ghi00190 Oxidative phosphorylation 4
ghi03020 RNA polymerase 3
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 7
ghi00190 Oxidative phosphorylation 5
ghi03010 Ribosome 2
ghi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 5
ath00195 Photosynthesis 5
ath00190 Oxidative phosphorylation 4
ath03020 RNA polymerase 3
ath00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 8
cit00190 Oxidative phosphorylation 8
cit03020 RNA polymerase 3
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 9
gma00195 Photosynthesis 6
gma03010 Ribosome 5
gma03020 RNA polymerase 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 8
vvi00195 Photosynthesis 7
vvi03010 Ribosome 5
vvi03020 RNA polymerase 3
vvi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 7
ppo00190 Oxidative phosphorylation 5
ppo03020 RNA polymerase 4
ppo03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 4
mtr03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 4
mtr00190 Oxidative phosphorylation 3
mtr00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 8
sly00195 Photosynthesis 5
sly03020 RNA polymerase 3
sly03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 9
sot03010 Ribosome 7
sot00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 7
nta03010 Ribosome 6
nta00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 11
osa00190 Oxidative phosphorylation 6
osa00195 Photosynthesis 6
osa03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 9
zma00195 Photosynthesis 7
zma03020 RNA polymerase 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 8
sbi03010 Ribosome 5
sbi03020 RNA polymerase 4
sbi00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 6
bdi00970 Aminoacyl-tRNA biosynthesis 3
bdi00630 Glyoxylate and dicarboxylate metabolism 2
bdi00710 Carbon fixation by Calvin cycle 2
bdi01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 3989194 121229291 844786 4271232 3989294 4025096 4929642 5333173 116656607 3950420 4099858 800455 3131442 845236 4549111 6439795
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