ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	rps2	30S ribosomal protein S2
ghi-r.1	121229291	30S ribosomal protein S2, chloroplastic
ath-u.5	rps2	ribosomal protein S2
cit-r.1	rps2	ribosomal protein S2
gma-u.5	rps2	30S ribosomal protein S2
vvi-u.5	rps2	30S ribosomal protein S2
ppo-u.5	rps2	ribosomal protein S2
mtr-u.5	116656607	uS2 ribosome protein
mtr-u.5	rps2	ribosomal protein S2
sly-u.5	rps2	ribosomal protein S2
sot-r.1	rps2	ribosomal protein S2
nta-r.1	rps2	30S ribosomal protein S2
osa-u.5	rps2	ribosomal protein S2
zma-u.5	rps2	ribosomal protein S2
sbi-r.1	rps2	ribosomal protein S2
bdi-r.1	rps2	ribosomal protein S2

functional annotation

KEGG

ghi03010 [list] [network] Ribosome (2429 genes)

GO BP

GO CC

GO MF

Protein

YP_538924.1 [sequence] [blastp]

Subcellular
localization
wolf

mito 5, cyto 2, golg 1, cyto_nucl 1

(predict for YP_538924.1)

Subcellular
localization
TargetP

other 6, mito 3

(predict for YP_538924.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for rps2	ghi-r.1 for 121229291	ath-u.5 for rps2	cit-r.1 for rps2	gma-u.5 for rps2	vvi-u.5 for rps2	ppo-u.5 for rps2	mtr-u.5 for 116656607	mtr-u.5 for rps2	sly-u.5 for rps2	sot-r.1 for rps2	nta-r.1 for rps2	osa-u.5 for rps2	zma-u.5 for rps2	sbi-r.1 for rps2	bdi-r.1 for rps2

Ortholog ID: 11535

Species

ghi

ath

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

sbi

bdi

Symbol

rps2

LOC121229291

rps2

LOC116656607

rps2

Function^*

30S ribosomal protein S2

30S ribosomal protein S2, chloroplastic

ribosomal protein S2

30S ribosomal protein S2

ribosomal protein S2

uS2 ribosome protein

ribosomal protein S2

30S ribosomal protein S2

ribosomal protein S2

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00195	Photosynthesis	6
ghi00190	Oxidative phosphorylation	4
ghi03020	RNA polymerase	3
ghi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00195	Photosynthesis	7
ghi00190	Oxidative phosphorylation	5
ghi03010	Ribosome	2
ghi03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	5
ath00195	Photosynthesis	5
ath00190	Oxidative phosphorylation	4
ath03020	RNA polymerase	3
ath00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00195	Photosynthesis	8
cit00190	Oxidative phosphorylation	8
cit03020	RNA polymerase	3
cit03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	9
gma00195	Photosynthesis	6
gma03010	Ribosome	5
gma03020	RNA polymerase	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00190	Oxidative phosphorylation	8
vvi00195	Photosynthesis	7
vvi03010	Ribosome	5
vvi03020	RNA polymerase	3
vvi00970	Aminoacyl-tRNA biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00195	Photosynthesis	7
ppo00190	Oxidative phosphorylation	5
ppo03020	RNA polymerase	4
ppo03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	4
mtr00190	Oxidative phosphorylation	3
mtr00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00195	Photosynthesis	4
mtr03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	8
sly00195	Photosynthesis	5
sly03020	RNA polymerase	3
sly03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	9
sot03010	Ribosome	7
sot00195	Photosynthesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	7
nta03010	Ribosome	6
nta00195	Photosynthesis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	11
osa00190	Oxidative phosphorylation	6
osa00195	Photosynthesis	6
osa03020	RNA polymerase	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	9
zma00195	Photosynthesis	7
zma03020	RNA polymerase	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00190	Oxidative phosphorylation	8
sbi03010	Ribosome	5
sbi03020	RNA polymerase	4
sbi00195	Photosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00195	Photosynthesis	6
bdi00970	Aminoacyl-tRNA biosynthesis	3
bdi00630	Glyoxylate and dicarboxylate metabolism	2
bdi00710	Carbon fixation by Calvin cycle	2
bdi01200	Carbon metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

3989194

121229291

844786

4271232

3989294

4025096

4929642

116656607

5333173

3950420

4099858

800455

3131442

845236

4549111

6439795

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to rps2 (ghi-r.1 coexpression data)

Top 50 enrichment test to rps2 (ghi-r.1 coexpression data)


Species	ghi	ath	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	sbi	bdi	bra	cre	tae	bna	hvu
Paralog	2	1	1	1	1	1	2	1	1	1	1	1	1	1	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to rps2 (ghi-r.1 coexpression data)

Top 50 enrichment test to rps2 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**