ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	121231959	ABSCISIC ACID-INSENSITIVE 5-like protein 5
ghi-r.1	107897053	bZIP transcription factor 23
ghi-r.1	107905577	ABSCISIC ACID-INSENSITIVE 5-like protein 5
ghi-r.1	107908901	ABSCISIC ACID-INSENSITIVE 5-like protein 7
ath-u.5	ABF1	abscisic acid responsive element-binding factor 1
ath-u.5	ABF4	ABRE binding factor 4
ath-u.5	ABF3	abscisic acid responsive elements-binding factor 3
bra-r.6	103842661	ABSCISIC ACID-INSENSITIVE 5-like protein 6
bra-r.6	103869470	ABSCISIC ACID-INSENSITIVE 5-like protein 7
bra-r.6	103848367	ABSCISIC ACID-INSENSITIVE 5-like protein 5
bna-r.1	111198524	ABSCISIC ACID-INSENSITIVE 5-like protein 5
bna-r.1	111204764	ABSCISIC ACID-INSENSITIVE 5-like protein 7
bna-r.1	125604632	ABSCISIC ACID-INSENSITIVE 5-like protein 7
cit-r.1	102618173	bZIP transcription factor 23
cit-r.1	102608792	bZIP transcription factor TRAB1-like
gma-u.5	100819313	bZIP transcription factor TRAB1
gma-u.5	100776600	ABSCISIC ACID-INSENSITIVE 5-like protein 4
gma-u.5	BZIP71	transcription factor bZIP71
vvi-u.5	100243434	bZIP transcription factor 46
vvi-u.5	GRIP55	ripening-related bZIP protein-like
ppo-u.5	18104883	ABSCISIC ACID-INSENSITIVE 5-like protein 5
ppo-u.5	18097783	ABSCISIC ACID-INSENSITIVE 5-like protein 7
ppo-u.5	7490036	ABSCISIC ACID-INSENSITIVE 5-like protein 7
mtr-u.5	11435200	bZIP transcription factor 46
mtr-u.5	11446220	ABSCISIC ACID-INSENSITIVE 5-like protein 7
sly-u.5	ABF4	ABA responsive transcription factor
sly-u.5	AREB1	ABA-response element binding factor AREB1
sly-u.5	101263766	ABSCISIC ACID-INSENSITIVE 5-like protein 7
sot-r.1	102577461	ABRE binding factor
sot-r.1	102581652	ABSCISIC ACID-INSENSITIVE 5-like protein 7
sot-r.1	102591655	ABSCISIC ACID-INSENSITIVE 5-like protein 7
nta-r.1	107767352	ABSCISIC ACID-INSENSITIVE 5-like protein 7
nta-r.1	107770065	ABSCISIC ACID-INSENSITIVE 5-like protein 4
nta-r.1	107771050	ABSCISIC ACID-INSENSITIVE 5-like protein 5
osa-u.5	4345807	bZIP transcription factor TRAB1-like
osa-u.5	4340462	bZIP transcription factor 46-like
osa-u.5	4330838	bZIP transcription factor 23-like
zma-u.5	100193967	uncharacterized LOC100193967
zma-u.5	100191233	uncharacterized LOC100191233
zma-u.5	100284582	uncharacterized LOC100284582
tae-r.2	123145706	bZIP transcription factor 23
tae-r.2	100146100	bZIP transcription factor TRAB1
tae-r.2	123165557	bZIP transcription factor 46
hvu-r.1	123411187	bZIP transcription factor 46-like
hvu-r.1	123401320	bZIP transcription factor 23
hvu-r.1	123398640	bZIP transcription factor TRAB1-like
sbi-r.1	110437038	bZIP transcription factor TRAB1-like
sbi-r.1	8060437	bZIP transcription factor TRAB1
sbi-r.1	8077354	bZIP transcription factor 23
bdi-r.1	100845340	bZIP transcription factor TRAB1
bdi-r.1	100825896	bZIP transcription factor 46
bdi-r.1	100833178	bZIP transcription factor 23

Top 50 coexpressed genes to 121231959 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 121231959 (ghi-r.1 coexpression data)

CoexMap"121231959"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0045893 [list] [network] positive regulation of DNA-templated transcription

(680 genes)

IEA

GO CC

GO:0005634 [list] [network] nucleus

(7681 genes)

IEA

GO MF

GO:0003700 [list] [network] DNA-binding transcription factor activity

(3140 genes)

IEA

Protein

XP_040973062.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 5, cyto_nucl 4, chlo 2, cyto 1, chlo_mito 1

(predict for XP_040973062.1)

Subcellular
localization
TargetP

other 6, mito 3

(predict for XP_040973062.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 121231959	ghi-r.1 for 107897053	ghi-r.1 for 107905577	ghi-r.1 for 107908901	ath-u.5 for ABF1	ath-u.5 for ABF4	ath-u.5 for ABF3	bra-r.6 for 103842661	bra-r.6 for 103869470	bra-r.6 for 103848367	bna-r.1 for 111198524	bna-r.1 for 111204764	bna-r.1 for 125604632	cit-r.1 for 102618173	cit-r.1 for 102608792	gma-u.5 for 100819313	gma-u.5 for 100776600	gma-u.5 for BZIP71	vvi-u.5 for 100243434	vvi-u.5 for GRIP55	ppo-u.5 for 18104883	ppo-u.5 for 18097783	ppo-u.5 for 7490036	mtr-u.5 for 11435200	mtr-u.5 for 11446220	sly-u.5 for ABF4	sly-u.5 for AREB1	sly-u.5 for 101263766	sot-r.1 for 102577461	sot-r.1 for 102581652	sot-r.1 for 102591655	nta-r.1 for 107767352	nta-r.1 for 107770065	nta-r.1 for 107771050	osa-u.5 for 4345807	osa-u.5 for 4340462	osa-u.5 for 4330838	zma-u.5 for 100193967	zma-u.5 for 100191233	zma-u.5 for 100284582	tae-r.2 for 123145706	tae-r.2 for 100146100	tae-r.2 for 123165557	hvu-r.1 for 123411187	hvu-r.1 for 123401320	hvu-r.1 for 123398640	sbi-r.1 for 110437038	sbi-r.1 for 8060437	sbi-r.1 for 8077354	bdi-r.1 for 100845340	bdi-r.1 for 100825896	bdi-r.1 for 100833178

Ortholog

Ortholog ID: 880

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

LOC107905577

LOC107908901

LOC107952130

ABF1

ABF3

ABF2

BZIP71

GRIP55

ABF4

AREB1

Function^*

ABSCISIC ACID-INSENSITIVE 5-like protein 5

ABSCISIC ACID-INSENSITIVE 5-like protein 7

ABSCISIC ACID-INSENSITIVE 5-like protein 5

abscisic acid responsive element-binding factor 1

abscisic acid responsive elements-binding factor 3

abscisic acid responsive elements-binding factor 2

ABSCISIC ACID-INSENSITIVE 5-like protein 7

ABSCISIC ACID-INSENSITIVE 5-like protein 6

bZIP transcription factor 23

bZIP transcription factor TRAB1-like

bZIP transcription factor TRAB1

ABSCISIC ACID-INSENSITIVE 5-like protein 4

transcription factor bZIP71

bZIP transcription factor 46

ripening-related bZIP protein-like

ABSCISIC ACID-INSENSITIVE 5-like protein 5

ABSCISIC ACID-INSENSITIVE 5-like protein 7

bZIP transcription factor TRAB1

bZIP transcription factor 46

ABSCISIC ACID-INSENSITIVE 5-like protein 7

ABA responsive transcription factor

ABA-response element binding factor AREB1

ABSCISIC ACID-INSENSITIVE 5-like protein 7

ABRE binding factor

ABSCISIC ACID-INSENSITIVE 5-like protein 7

ABSCISIC ACID-INSENSITIVE 5-like protein 4

bZIP transcription factor TRAB1-like

bZIP transcription factor 46-like

ABSCISIC ACID-INSENSITIVE 5-like protein 7

bZIP transcription factor TRAB1-like

bZIP transcription factor 23-like

bZIP transcription factor TRAB1-like

uncharacterized LOC100191233

uncharacterized LOC100216617

bZIP transcription factor TRAB1

bZIP transcription factor 46

bZIP transcription factor 23

bZIP transcription factor 46

bZIP transcription factor 46-like

bZIP transcription factor 23

bZIP transcription factor TRAB1-like

bZIP transcription factor TRAB1

bZIP transcription factor 23

bZIP transcription factor TRAB1

bZIP transcription factor 46

bZIP transcription factor 23

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	12
ghi00562	Inositol phosphate metabolism	2
ghi04070	Phosphatidylinositol signaling system	2
ghi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	6
ghi00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	10
ghi00562	Inositol phosphate metabolism	2
ghi04070	Phosphatidylinositol signaling system	2
ghi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04712	Circadian rhythm - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	6
ath04016	MAPK signaling pathway - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	6
ath04016	MAPK signaling pathway - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04712	Circadian rhythm - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	3
bra01200	Carbon metabolism	2
bra01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	5
cit04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	8
gma04016	MAPK signaling pathway - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	6
gma04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	9
gma04016	MAPK signaling pathway - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	4
vvi04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	6
vvi04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	6
ppo04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	7
ppo04016	MAPK signaling pathway - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	5
mtr04016	MAPK signaling pathway - plant	4
mtr00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	7
sly04016	MAPK signaling pathway - plant	5
sly00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	7
sly04016	MAPK signaling pathway - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	6
sot04016	MAPK signaling pathway - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00785	Lipoic acid metabolism	2
sot01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	7
nta04016	MAPK signaling pathway - plant	5
nta04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	12
nta04016	MAPK signaling pathway - plant	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	7
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	7
osa04016	MAPK signaling pathway - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	8
osa04016	MAPK signaling pathway - plant	5
osa00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	6
osa04016	MAPK signaling pathway - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	2
zma04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	9
zma04016	MAPK signaling pathway - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	11
zma04016	MAPK signaling pathway - plant	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	6
tae00010	Glycolysis / Gluconeogenesis	3
tae00030	Pentose phosphate pathway	3
tae00051	Fructose and mannose metabolism	3
tae00052	Galactose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	9
tae04016	MAPK signaling pathway - plant	3
tae00010	Glycolysis / Gluconeogenesis	3
tae00030	Pentose phosphate pathway	3
tae00051	Fructose and mannose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	6
tae00010	Glycolysis / Gluconeogenesis	3
tae00030	Pentose phosphate pathway	3
tae00051	Fructose and mannose metabolism	3
tae00052	Galactose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	4
hvu04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	4
hvu04016	MAPK signaling pathway - plant	3
hvu04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
sbi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00562	Inositol phosphate metabolism	2
sbi04070	Phosphatidylinositol signaling system	2
sbi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	7
sbi04016	MAPK signaling pathway - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	6
bdi04016	MAPK signaling pathway - plant	4
bdi00100	Steroid biosynthesis	2
bdi00909	Sesquiterpenoid and triterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	7
bdi04016	MAPK signaling pathway - plant	6

Expression

Expression pattern

Entrez Gene ID^*

107905577

107908901

107952130

841395

829547

841095

103869470

103859804

103837451

125604632

106390804

106346026

102618173

102608792

100819313

100776600

100101876

100243434

100232889

18104883

18097783

7462880

11435200

11446220

100820704

544204

101263766

102577461

102581652

102597983

107824387

107807756

107782185

4345807

4330838

4347257

100191233

100216617

103643147

123165557

123128583

123149675

123411187

123401320

123398640

110437038

8060437

8077354

100845340

100825896

100833178

The preparation time of this page was 3.6 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	3	3	2	3	2	3	2	3	3	3	3	3	3	3	3	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 121231959 (ghi-r.1 coexpression data)

Top 50 enrichment test to 121231959 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**