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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123048735   small RNA 2'-O-methyltransferase 
 tae-r.2   123052816   small RNA 2'-O-methyltransferase 
 tae-r.2   123188691   small RNA 2'-O-methyltransferase 
 tae-r.2   123044943   small RNA 2'-O-methyltransferase 
 hvu-r.1   123426220   small RNA 2'-O-methyltransferase 
 bdi-r.1   100832180   small RNA 2'-O-methyltransferase 
 osa-u.5   4342471   small RNA 2'-O-methyltransferase 
 zma-u.5   103637342   small RNA 2'-O-methyltransferase 
 zma-u.5   103631972   small RNA 2'-O-methyltransferase 
 sbi-r.1   8081159   small RNA 2'-O-methyltransferase 
 ath-u.5   HEN1   double-stranded RNA binding protein-related / DsRBD protein-like protein 
 gma-u.5   HEN1A   protein Hua enhancer 1a 
 gma-u.5   HEN1B   protein Hua enhancer 1b 
 sly-u.5   101264590   small RNA 2'-O-methyltransferase 
 bra-r.6   103858478   small RNA 2'-O-methyltransferase 
 vvi-u.5   100259382   small RNA 2'-O-methyltransferase 
 ppo-u.5   18103519   small RNA 2'-O-methyltransferase 
 ppo-u.5   7471687   small RNA 2'-O-methyltransferase 
 mtr-u.5   25493375   small RNA 2'-O-methyltransferase 
 ghi-r.1   121203428   small RNA 2'-O-methyltransferase 
 ghi-r.1   107962954   small RNA 2'-O-methyltransferase 
 bna-r.1   106375681   small RNA 2'-O-methyltransferase 
 bna-r.1   106375682   small RNA 2'-O-methyltransferase 
 bna-r.1   106375683   small RNA 2'-O-methyltransferase 
 sot-r.1   102595903   small RNA 2'-O-methyltransferase 
 cit-r.1   102613903   small RNA 2'-O-methyltransferase-like 
 nta-r.1   107768656   small RNA 2'-O-methyltransferase-like 
 nta-r.1   107779312   small RNA 2'-O-methyltransferase 
 cre-r.1   CHLRE_03g191200v5   uncharacterized protein 

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Top 50 coexpressed genes to 123048735 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123048735 (tae-r.2 coexpression data)

CoexMap""


taeLOC123048735 | Entrez gene ID : 123048735    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 1 1 1 2 1 1 2 1 1 1 2 1 2 3 1 1 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
Function small RNA 2'-O-methyltransferase
KEGG
GO BP
GO:0034587 [list] [network] piRNA processing  (4 genes)  IEA  
GO:0030422 [list] [network] siRNA processing  (53 genes)  IEA  
GO:0001510 [list] [network] RNA methylation  (203 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (8281 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (13575 genes)  IEA  
GO MF
GO:0008173 [list] [network] RNA methyltransferase activity  (214 genes)  IEA  
GO:0008171 [list] [network] O-methyltransferase activity  (235 genes)  IEA  
Protein XP_044327713.1 [sequence] [blastp]
XP_044327714.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 4,  plas 1  (predict for XP_044327713.1)
chlo 4,  nucl 4,  plas 1  (predict for XP_044327714.1)
Subcellular
localization
TargetP
other 6,  mito 5  (predict for XP_044327713.1)
other 6,  mito 5  (predict for XP_044327714.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123048735
tae-r.2
for
123052816
tae-r.2
for
123188691
tae-r.2
for
123044943
hvu-r.1
for
123426220
bdi-r.1
for
100832180
osa-u.5
for
4342471
zma-u.5
for
103637342
zma-u.5
for
103631972
sbi-r.1
for
8081159
ath-u.5
for
HEN1
gma-u.5
for
HEN1A
gma-u.5
for
HEN1B
sly-u.5
for
101264590
bra-r.6
for
103858478
vvi-u.5
for
100259382
ppo-u.5
for
18103519
ppo-u.5
for
7471687
mtr-u.5
for
25493375
ghi-r.1
for
121203428
ghi-r.1
for
107962954
bna-r.1
for
106375681
bna-r.1
for
106375682
bna-r.1
for
106375683
sot-r.1
for
102595903
cit-r.1
for
102613903
nta-r.1
for
107768656
nta-r.1
for
107779312
cre-r.1
for
CHLRE_03g191200v5

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Ortholog ID: 6305
Species tae tae tae hvu bdi osa zma zma sbi ath gma gma sly bra vvi ppo ppo mtr ghi ghi bna bna bna sot cit nta nta cre
Symbol LOC123048735 LOC123052816 LOC123044943 LOC123426220 LOC100832180 LOC4342471 LOC103637342 LOC103631972 LOC8081159 HEN1 HEN1A HEN1B LOC101264590 LOC103858478 LOC100259382 LOC18103519 LOC7471687 LOC25493375 LOC121203428 LOC107962954 LOC106375681 LOC106375682 LOC106375683 LOC102595903 LOC102613903 LOC107768656 LOC107779312 CHLRE_03g191200v5
Function* small RNA 2'-O-methyltransferase small RNA 2'-O-methyltransferase small RNA 2'-O-methyltransferase small RNA 2'-O-methyltransferase small RNA 2'-O-methyltransferase small RNA 2'-O-methyltransferase small RNA 2'-O-methyltransferase small RNA 2'-O-methyltransferase small RNA 2'-O-methyltransferase double-stranded RNA binding protein-related / DsRBD protein-like protein protein Hua enhancer 1a protein Hua enhancer 1b small RNA 2'-O-methyltransferase small RNA 2'-O-methyltransferase small RNA 2'-O-methyltransferase small RNA 2'-O-methyltransferase small RNA 2'-O-methyltransferase small RNA 2'-O-methyltransferase small RNA 2'-O-methyltransferase small RNA 2'-O-methyltransferase small RNA 2'-O-methyltransferase small RNA 2'-O-methyltransferase small RNA 2'-O-methyltransferase small RNA 2'-O-methyltransferase small RNA 2'-O-methyltransferase-like small RNA 2'-O-methyltransferase-like small RNA 2'-O-methyltransferase uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
tae03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
hvu04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03440 Homologous recombination 3
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 4
zma03015 mRNA surveillance pathway 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
sbi03083 Polycomb repressive complex 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03030 DNA replication 3
ath03410 Base excision repair 3
ath03420 Nucleotide excision repair 3
ath03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 7
vvi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 4
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 4
ghi01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi03083 Polycomb repressive complex 2
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 6
bna03013 Nucleocytoplasmic transport 6
bna03250 Viral life cycle - HIV-1 6
bna03083 Polycomb repressive complex 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123048735 123052816 123044943 123426220 100832180 4342471 103637342 103631972 8081159 827839 100815299 100785461 101264590 103858478 100259382 18103519 7471687 25493375 121203428 107962954 106375681 106375682 106375683 102595903 102613903 107768656 107779312 66052939
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