ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
tae-r.2	123051791	rhomboid-like protein 19
tae-r.2	123051129	rhomboid-like protein 19
tae-r.2	123043264	rhomboid-like protein 19
tae-r.2	123043927	rhomboid-like protein 19
hvu-r.1	123424422	rhomboid-like protein 19
hvu-r.1	123424976	rhomboid-like protein 19
bdi-r.1	100823911	rhomboid-like protein 19
bdi-r.1	100834285	rhomboid-like protein 19
bdi-r.1	100836417	rhomboid-like protein 19
osa-u.5	4344140	rhomboid-like protein 19
osa-u.5	4334896	rhomboid-like protein 19
zma-u.5	100283447	uncharacterized LOC100283447
zma-u.5	100272463	Rhomboid-like protein 19
zma-u.5	100216993	Rhomboid-like protein 19
sbi-r.1	8056948	rhomboid-like protein 19
sbi-r.1	8072229	rhomboid-like protein 19
sbi-r.1	8082619	rhomboid-like protein 19
ath-u.5	AT3G07950	rhomboid protein-like protein
gma-u.5	100777370	rhomboid-like protein 19
gma-u.5	100799282	rhomboid-like protein 19
gma-u.5	100805179	rhomboid-like protein 19
sly-u.5	101259931	rhomboid-like protein 19
bra-r.6	103870622	rhomboid-like protein 19
bra-r.6	103848942	rhomboid-like protein 19
vvi-u.5	100258140	rhomboid-like protein 19
ppo-u.5	7479886	rhomboid-like protein 19
ppo-u.5	7468410	rhomboid-like protein 19
mtr-u.5	11427992	rhomboid-like protein 19
ghi-r.1	107937603	rhomboid-like protein 19
ghi-r.1	107943716	rhomboid-like protein 19
ghi-r.1	121222547	rhomboid-like protein 19
bna-r.1	106452861	rhomboid-like protein 19
bna-r.1	125599866	rhomboid-like protein 19
bna-r.1	106397345	rhomboid-like protein 19
sot-r.1	102600974	rhomboid-like protein 19
cit-r.1	102630569	rhomboid-like protein 19
nta-r.1	107808565	rhomboid-like protein 19
nta-r.1	107791014	rhomboid-like protein 19
cre-r.1	CHLRE_17g706850v5	uncharacterized protein

Top 50 coexpressed genes to 123051791 (tae-r.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123051791 (tae-r.2 coexpression data)

CoexMap"123051791"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006890 [list] [network] retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum

(117 genes)

IEA

GO CC

GO:0005794 [list] [network] Golgi apparatus	(1208 genes)	IEA
GO:0016020 [list] [network] membrane	(10843 genes)	IEA

GO MF

Protein

XP_044330703.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, plas 4

(predict for XP_044330703.1)

Subcellular
localization
TargetP

other 7

(predict for XP_044330703.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123051791	tae-r.2 for 123051129	tae-r.2 for 123043264	tae-r.2 for 123043927	hvu-r.1 for 123424422	hvu-r.1 for 123424976	bdi-r.1 for 100823911	bdi-r.1 for 100834285	bdi-r.1 for 100836417	osa-u.5 for 4344140	osa-u.5 for 4334896	zma-u.5 for 100283447	zma-u.5 for 100272463	zma-u.5 for 100216993	sbi-r.1 for 8056948	sbi-r.1 for 8072229	sbi-r.1 for 8082619	ath-u.5 for AT3G07950	gma-u.5 for 100777370	gma-u.5 for 100799282	gma-u.5 for 100805179	sly-u.5 for 101259931	bra-r.6 for 103870622	bra-r.6 for 103848942	vvi-u.5 for 100258140	ppo-u.5 for 7479886	ppo-u.5 for 7468410	mtr-u.5 for 11427992	ghi-r.1 for 107937603	ghi-r.1 for 107943716	ghi-r.1 for 121222547	bna-r.1 for 106452861	bna-r.1 for 125599866	bna-r.1 for 106397345	sot-r.1 for 102600974	cit-r.1 for 102630569	nta-r.1 for 107808565	nta-r.1 for 107791014	cre-r.1 for CHLRE_17g706850v5

Ortholog

Ortholog ID: 3571

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

rhomboid-like protein 19

uncharacterized LOC100283447

uncharacterized LOC100192037

uncharacterized LOC100194098

rhomboid-like protein 19

rhomboid protein-like protein

rhomboid-like protein 19

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03060	Protein export	3
tae03082	ATP-dependent chromatin remodeling	3
tae00510	N-Glycan biosynthesis	2
tae00513	Various types of N-glycan biosynthesis	2
tae04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00520	Amino sugar and nucleotide sugar metabolism	6
tae01250	Biosynthesis of nucleotide sugars	6
tae00040	Pentose and glucuronate interconversions	2
tae00053	Ascorbate and aldarate metabolism	2
tae00541	Biosynthesis of various nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00510	N-Glycan biosynthesis	5
tae00513	Various types of N-glycan biosynthesis	5
tae04141	Protein processing in endoplasmic reticulum	5
tae00310	Lysine degradation	3
tae03060	Protein export	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00520	Amino sugar and nucleotide sugar metabolism	2
hvu01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01240	Biosynthesis of cofactors	2
hvu00510	N-Glycan biosynthesis	2
hvu00513	Various types of N-glycan biosynthesis	2
hvu04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01250	Biosynthesis of nucleotide sugars	3
bdi00520	Amino sugar and nucleotide sugar metabolism	2
bdi00541	Biosynthesis of various nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	3
osa04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00520	Amino sugar and nucleotide sugar metabolism	4
osa01250	Biosynthesis of nucleotide sugars	4
osa04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	7
zma00510	N-Glycan biosynthesis	6
zma00513	Various types of N-glycan biosynthesis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00520	Amino sugar and nucleotide sugar metabolism	3
zma01250	Biosynthesis of nucleotide sugars	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00520	Amino sugar and nucleotide sugar metabolism	3
sbi01250	Biosynthesis of nucleotide sugars	3
sbi00020	Citrate cycle (TCA cycle)	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	5
sbi00510	N-Glycan biosynthesis	3
sbi03082	ATP-dependent chromatin remodeling	2
sbi03083	Polycomb repressive complex	2
sbi00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00562	Inositol phosphate metabolism	2
gma00564	Glycerophospholipid metabolism	2
gma04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03060	Protein export	2
gma04075	Plant hormone signal transduction	2
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	2
bra04141	Protein processing in endoplasmic reticulum	2
bra04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01200	Carbon metabolism	3
vvi00785	Lipoic acid metabolism	2
vvi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	6
ppo04142	Lysosome	5
ppo04145	Phagosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03060	Protein export	2
mtr00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	5
ghi00010	Glycolysis / Gluconeogenesis	2
ghi04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	4
ghi00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	4
ghi03015	mRNA surveillance pathway	2
ghi04382	Cornified envelope formation	2
ghi00510	N-Glycan biosynthesis	2
ghi00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	4
bna00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	4
bna00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	4
bna00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	4
cit00510	N-Glycan biosynthesis	3
cit00513	Various types of N-glycan biosynthesis	3
cit04626	Plant-pathogen interaction	3
cit04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04130	SNARE interactions in vesicular transport	4
nta00440	Phosphonate and phosphinate metabolism	2
nta00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00514	Other types of O-glycan biosynthesis	3
cre00520	Amino sugar and nucleotide sugar metabolism	2
cre01250	Biosynthesis of nucleotide sugars	2

Expression

Expression pattern

Entrez Gene ID^*

123051791

123051129

123043927

123424422

123424976

100823911

100834285

100836417

4344140

4334896

100283447

100192037

100194098

8056948

8072229

8082619

819986

100777370

100799282

100805179

101259931

103870622

103848942

100258140

7479886

7468410

11427992

107943716

107913476

107904262

106452861

125599866

106427984

102600974

102630569

107808565

107791014

5717197

The preparation time of this page was 0.2 [sec].


Species	tae	hvu	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	2	3	2	3	3	1	3	1	2	1	2	1	3	3	1	1	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123051791 (tae-r.2 coexpression data)

Top 50 enrichment test to 123051791 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**