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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123054507   SNF2 domain-containing protein CLASSY 1 
 tae-r.2   123070118   SNF2 domain-containing protein CLASSY 3 
 tae-r.2   123181895   SNF2 domain-containing protein CLASSY 1 
 hvu-r.1   123442278   SNF2 domain-containing protein CLASSY 3-like 
 bdi-r.1   100831563   SNF2 domain-containing protein CLASSY 3-like 
 bdi-r.1   100833676   SNF2 domain-containing protein CLASSY 1 
 osa-u.5   4338690   SNF2 domain-containing protein CLASSY 4 
 zma-u.5   103630322   SNF2 domain-containing protein CLASSY 4 
 sbi-r.1   8076856   SNF2 domain-containing protein CLASSY 4 
 ath-u.5   CHR40   chromatin remodeling 40 
 ath-u.5   chr31   chromatin remodeling 31 
 gma-u.5   100807262   SNF2 domain-containing protein CLASSY 3 
 gma-u.5   100806733   SNF2 domain-containing protein CLASSY 3 
 sly-u.5   104647043   SNF2 domain-containing protein CLASSY 4-like 
 bra-r.6   103828642   SNF2 domain-containing protein CLASSY 4 
 bra-r.6   103844121   SNF2 domain-containing protein CLASSY 3 
 bra-r.6   103860031   SNF2 domain-containing protein CLASSY 4 
 mtr-u.5   25498158   SNF2 domain-containing protein CLASSY 3 
 ghi-r.1   121212718   SNF2 domain-containing protein CLASSY 3 
 bna-r.1   106414127   SNF2 domain-containing protein CLASSY 4-like 
 bna-r.1   125579402   SNF2 domain-containing protein CLASSY 3-like 
 sot-r.1   107060234   SNF2 domain-containing protein CLASSY 4-like 
 sot-r.1   107062111   SNF2 domain-containing protein CLASSY 4-like 
 cit-r.1   102613667   SNF2 domain-containing protein CLASSY 3-like 
 nta-r.1   107779582   SNF2 domain-containing protein CLASSY 4-like 
 nta-r.1   107809717   SNF2 domain-containing protein CLASSY 4-like 

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Top 50 coexpressed genes to 123054507 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123054507 (tae-r.2 coexpression data)

CoexMap"123054507"


taeLOC123054507 | Entrez gene ID : 123054507    
Species tae hvu bdi osa zma sbi ath gma sly bra mtr ghi bna sot cit nta cre ppo vvi
Paralog 3 1 2 1 1 1 2 2 1 3 1 1 2 2 1 2 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes03440 [list] [network] Homologous recombination (198 genes)
GO BP
GO:0080188 [list] [network] gene silencing by siRNA-directed DNA methylation  (94 genes)  IEA  
GO CC
GO MF
GO:0005524 [list] [network] ATP binding  (7858 genes)  IEA  
Protein XP_044334225.1 [sequence] [blastp]
XP_044334232.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  chlo 3,  nucl 3,  cyto_mito 2  (predict for XP_044334225.1)
mito 4,  chlo 3,  nucl 3,  cyto_mito 2  (predict for XP_044334232.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_044334225.1)
mito 8  (predict for XP_044334232.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123054507
tae-r.2
for
123070118
tae-r.2
for
123181895
hvu-r.1
for
123442278
bdi-r.1
for
100831563
bdi-r.1
for
100833676
osa-u.5
for
4338690
zma-u.5
for
103630322
sbi-r.1
for
8076856
ath-u.5
for
CHR40
ath-u.5
for
chr31
gma-u.5
for
100807262
gma-u.5
for
100806733
sly-u.5
for
104647043
bra-r.6
for
103828642
bra-r.6
for
103844121
bra-r.6
for
103860031
mtr-u.5
for
25498158
ghi-r.1
for
121212718
bna-r.1
for
106414127
bna-r.1
for
125579402
sot-r.1
for
107060234
sot-r.1
for
107062111
cit-r.1
for
102613667
nta-r.1
for
107779582
nta-r.1
for
107809717


Ortholog ID: 1747
Species tae tae hvu bdi bdi osa zma sbi ath ath gma gma sly sly bra bra bra ghi bna bna sot sot cit nta nta
Symbol LOC123181895 LOC123131456 LOC123442278 LOC100831563 LOC100833676 LOC4338690 LOC103630322 LOC8076856 CHR40 chr31 LOC100807262 LOC100806733 LOC101252104 LOC101265473 LOC103828642 LOC103844121 LOC103860031 LOC121212718 LOC106414127 LOC106397725 LOC102589702 LOC107060232 LOC102613667 LOC107779582 LOC107809717
Function* SNF2 domain-containing protein CLASSY 1 SNF2 domain-containing protein CLASSY 1 SNF2 domain-containing protein CLASSY 3-like SNF2 domain-containing protein CLASSY 3-like SNF2 domain-containing protein CLASSY 1 SNF2 domain-containing protein CLASSY 4 SNF2 domain-containing protein CLASSY 4 SNF2 domain-containing protein CLASSY 4 chromatin remodeling 40 chromatin remodeling 31 SNF2 domain-containing protein CLASSY 3 SNF2 domain-containing protein CLASSY 3 SNF2 domain-containing protein CLASSY 3-like SNF2 domain-containing protein CLASSY 4-like SNF2 domain-containing protein CLASSY 4 SNF2 domain-containing protein CLASSY 3 SNF2 domain-containing protein CLASSY 4 SNF2 domain-containing protein CLASSY 3 SNF2 domain-containing protein CLASSY 4-like SNF2 domain-containing protein CLASSY 3-like SNF2 domain-containing protein CLASSY 3-like SNF2 domain-containing protein CLASSY 4-like SNF2 domain-containing protein CLASSY 3-like SNF2 domain-containing protein CLASSY 4-like SNF2 domain-containing protein CLASSY 4-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
tae00250 Alanine, aspartate and glutamate metabolism 3
tae01232 Nucleotide metabolism 3
tae01240 Biosynthesis of cofactors 3
tae03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00562 Inositol phosphate metabolism 2
hvu04070 Phosphatidylinositol signaling system 2
hvu04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 3
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma04626 Plant-pathogen interaction 2
gma03040 Spliceosome 2
gma04141 Protein processing in endoplasmic reticulum 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma04141 Protein processing in endoplasmic reticulum 3
gma04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 3
sly03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 4
bra03430 Mismatch repair 3
bra03440 Homologous recombination 3
bra03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00940 Phenylpropanoid biosynthesis 3
ghi00100 Steroid biosynthesis 3
ghi03013 Nucleocytoplasmic transport 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi00514 Other types of O-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03440 Homologous recombination 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03440 Homologous recombination 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 4
nta04142 Lysosome 2
nta04148 Efferocytosis 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00630 Glyoxylate and dicarboxylate metabolism 2
nta01200 Carbon metabolism 2
nta04146 Peroxisome 2
nta03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123181895 123131456 123442278 100831563 100833676 4338690 103630322 8076856 822023 837051 100807262 100806733 101252104 101265473 103828642 103844121 103860031 121212718 106414127 106397725 102589702 107060232 102613667 107779582 107809717
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