ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
tae-r.2	123056975	patellin-3
tae-r.2	123079937	patellin-3
tae-r.2	123051017	patellin-6
tae-r.2	123062767	patellin-3
hvu-r.1	123446698	patellin-3-like
hvu-r.1	123444762	patellin-3-like
hvu-r.1	123437246	patellin-6
bdi-r.1	100834473	patellin-4
bdi-r.1	100838457	patellin-3
bdi-r.1	100843560	patellin-3
osa-u.5	4338870	patellin-3
osa-u.5	4324771	patellin-3
osa-u.5	4338479	patellin-6
zma-u.5	100282751	uncharacterized LOC100282751
zma-u.5	100281982	patellin-5
zma-u.5	100285100	patellin-5
sbi-r.1	8063113	patellin-3
sbi-r.1	8061600	patellin-4
sbi-r.1	8058498	patellin-3
ath-u.5	AT3G51670	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein
ath-u.5	AT4G09160	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein
gma-u.5	100805585	patellin-3
gma-u.5	100804544	patellin-3
gma-u.5	100804006	patellin-3-like
sly-u.5	101259282	patellin-6-like
sly-u.5	101255264	patellin-3-like
sly-u.5	101254657	patellin-4
bra-r.6	103841094	patellin-6
bra-r.6	103830806	patellin-3
bra-r.6	103858514	patellin-5
vvi-u.5	100262778	patellin-4
vvi-u.5	100246049	patellin-3
vvi-u.5	100246625	patellin-6
ppo-u.5	7475783	patellin-3
mtr-u.5	120580125	patellin-3
mtr-u.5	11441033	patellin-3
mtr-u.5	25484263	patellin-4
ghi-r.1	107890927	patellin-6
ghi-r.1	107919999	patellin-3
ghi-r.1	107913583	patellin-3
bna-r.1	125590649	patellin-6-like
bna-r.1	111199204	patellin-4-like
bna-r.1	106410591	patellin-4
sot-r.1	102580328	patellin-3-like
sot-r.1	102590713	patellin-6
sot-r.1	102592590	patellin-4
cit-r.1	102631478	patellin-6
cit-r.1	102614816	patellin-3
cit-r.1	102624830	patellin-4
nta-r.1	107777688	patellin-3
nta-r.1	107798991	patellin-6-like
nta-r.1	107763223	patellin-4-like
cre-r.1	CHLRE_02g101200v5	uncharacterized protein

Top 50 coexpressed genes to 123056975 (tae-r.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123056975 (tae-r.2 coexpression data)

CoexMap"123056975"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0008289 [list] [network] lipid binding

(863 genes)

IEA

Protein

XP_044336110.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 5, cyto 4, chlo 1, mito 1, chlo_mito 1

(predict for XP_044336110.1)

Subcellular
localization
TargetP

other 6, scret 4

(predict for XP_044336110.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123056975	tae-r.2 for 123079937	tae-r.2 for 123051017	tae-r.2 for 123062767	hvu-r.1 for 123446698	hvu-r.1 for 123444762	hvu-r.1 for 123437246	bdi-r.1 for 100834473	bdi-r.1 for 100838457	bdi-r.1 for 100843560	osa-u.5 for 4338870	osa-u.5 for 4324771	osa-u.5 for 4338479	zma-u.5 for 100282751	zma-u.5 for 100281982	zma-u.5 for 100285100	sbi-r.1 for 8063113	sbi-r.1 for 8061600	sbi-r.1 for 8058498	ath-u.5 for AT3G51670	ath-u.5 for AT4G09160	gma-u.5 for 100805585	gma-u.5 for 100804544	gma-u.5 for 100804006	sly-u.5 for 101259282	sly-u.5 for 101255264	sly-u.5 for 101254657	bra-r.6 for 103841094	bra-r.6 for 103830806	bra-r.6 for 103858514	vvi-u.5 for 100262778	vvi-u.5 for 100246049	vvi-u.5 for 100246625	ppo-u.5 for 7475783	mtr-u.5 for 120580125	mtr-u.5 for 11441033	mtr-u.5 for 25484263	ghi-r.1 for 107890927	ghi-r.1 for 107919999	ghi-r.1 for 107913583	bna-r.1 for 125590649	bna-r.1 for 111199204	bna-r.1 for 106410591	sot-r.1 for 102580328	sot-r.1 for 102590713	sot-r.1 for 102592590	cit-r.1 for 102631478	cit-r.1 for 102614816	cit-r.1 for 102624830	nta-r.1 for 107777688	nta-r.1 for 107798991	nta-r.1 for 107763223	cre-r.1 for CHLRE_02g101200v5

Ortholog

Ortholog ID: 403

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

patellin-3

patellin-6

patellin-4

patellin-3-like

patellin-4

patellin-3

patellin-6

patellin-4

uncharacterized LOC100282751

patellin-5

uncharacterized LOC100192106

patellin-3

patellin-4

patellin-3

SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein

Sec14p-like phosphatidylinositol transfer family protein

patellin-3

patellin-4-like

patellin-6-like

patellin-3-like

patellin-4

patellin-6

patellin-3

patellin-4

patellin-3

patellin-1

patellin-3

patellin-4

patellin-3-like

patellin-4-like

patellin-6-like

patellin-4

patellin-3

patellin-3-like

patellin-6

patellin-3

patellin-4

patellin-3

patellin-4-like

uncharacterized LOC107780867

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04626	Plant-pathogen interaction	3
bdi00062	Fatty acid elongation	2
bdi00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
bdi00270	Cysteine and methionine metabolism	2
bdi00350	Tyrosine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
bdi00270	Cysteine and methionine metabolism	2
bdi00350	Tyrosine metabolism	2
bdi00360	Phenylalanine metabolism	2
bdi00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	5
bdi04626	Plant-pathogen interaction	4
bdi00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
bdi00270	Cysteine and methionine metabolism	2
bdi00350	Tyrosine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04814	Motor proteins	6
sbi04145	Phagosome	2
sbi04517	IgSF CAM signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	4
sbi04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	5
gma00010	Glycolysis / Gluconeogenesis	2
gma00620	Pyruvate metabolism	2
gma01200	Carbon metabolism	2
gma01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00940	Phenylpropanoid biosynthesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00220	Arginine biosynthesis	2
bra01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04145	Phagosome	5
bra04517	IgSF CAM signaling	5
bra04814	Motor proteins	5
bra04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00500	Starch and sucrose metabolism	3
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04145	Phagosome	3
ppo04517	IgSF CAM signaling	3
ppo04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	8
ghi00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04145	Phagosome	2
ghi04148	Efferocytosis	2
ghi04517	IgSF CAM signaling	2
ghi04518	Integrin signaling	2
ghi04620	Toll-like receptor signaling pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04814	Motor proteins	3
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00260	Glycine, serine and threonine metabolism	4
nta00350	Tyrosine metabolism	4
nta00360	Phenylalanine metabolism	4
nta00410	beta-Alanine metabolism	4
nta00950	Isoquinoline alkaloid biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00510	N-Glycan biosynthesis	4
cre00513	Various types of N-glycan biosynthesis	4
cre04141	Protein processing in endoplasmic reticulum	4

Expression

Expression pattern

Entrez Gene ID^*

123079937

123051017

123159568

123446698

123444762

123413645

100838457

100843560

100843870

4324771

4338479

4341809

100282751

100281982

100192106

8063113

8061600

8058498

824330

839949

843547

100786707

100779100

101259282

101255264

101254657

103841094

103830806

103840314

100247827

100259349

7475783

18108470

120580125

11441033

25491806

107896868

107890710

107943697

106371088

106367248

106367752

102592590

102580007

102597890

102631478

102614816

102624830

107781650

107815177

107780867

5725565

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Species	tae	hvu	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	3	3	3	3	3	2	3	3	3	3	1	3	3	3	3	3	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123056975 (tae-r.2 coexpression data)

Top 50 enrichment test to 123056975 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**