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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123068715   pentatricopeptide repeat-containing protein At3g09040, mitochondrial 
 tae-r.2   123077224   pentatricopeptide repeat-containing protein At3g09040, mitochondrial 
 hvu-r.1   123442758   pentatricopeptide repeat-containing protein At3g09040, mitochondrial-like 
 bdi-r.1   112268514   pentatricopeptide repeat-containing protein At3g09040, mitochondrial 
 osa-u.5   4336394   pentatricopeptide repeat-containing protein At3g09040, mitochondrial 
 zma-u.5   103646227   pentatricopeptide repeat-containing protein At3g09040, mitochondrial 
 sbi-r.1   8075929   pentatricopeptide repeat-containing protein At3g09040, mitochondrial 
 ath-u.5   AT3G09040   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100800995   pentatricopeptide repeat-containing protein At3g09040, mitochondrial 
 sly-u.5   112940021   pentatricopeptide repeat-containing protein At3g09040, mitochondrial 
 bra-r.6   103859314   pentatricopeptide repeat-containing protein At3g09040, mitochondrial 
 vvi-u.5   100257512   pentatricopeptide repeat-containing protein At3g09040, mitochondrial 
 ghi-r.1   107910433   pentatricopeptide repeat-containing protein At3g09040, mitochondrial 
 ghi-r.1   107951520   pentatricopeptide repeat-containing protein At3g09040, mitochondrial 
 sot-r.1   102595255   pentatricopeptide repeat-containing protein At3g09040, mitochondrial 
 cit-r.1   102619190   pentatricopeptide repeat-containing protein At3g09040, mitochondrial 
 nta-r.1   107820458   pentatricopeptide repeat-containing protein At3g09040, mitochondrial-like 
 nta-r.1   107814835   pentatricopeptide repeat-containing protein At3g09040, mitochondrial 

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Top 50 coexpressed genes to 123068715 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123068715 (tae-r.2 coexpression data)

CoexMap"123060220"


taeLOC123060220 | Entrez gene ID : 123060220    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ghi sot cit nta mtr bna cre ppo
Paralog 2 1 1 1 1 1 1 1 1 1 1 2 1 1 2 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (1066 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (4004 genes)  IEA  
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044338741.1 [sequence] [blastp]
XP_044338742.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_044338741.1)
chlo 9,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_044338742.1)
Subcellular
localization
TargetP
mito 5,  other 4  (predict for XP_044338741.1)
mito 5,  other 4  (predict for XP_044338742.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123068715
tae-r.2
for
123077224
hvu-r.1
for
123442758
bdi-r.1
for
112268514
osa-u.5
for
4336394
zma-u.5
for
103646227
sbi-r.1
for
8075929
ath-u.5
for
AT3G09040
gma-u.5
for
100800995
sly-u.5
for
112940021
bra-r.6
for
103859314
vvi-u.5
for
100257512
ghi-r.1
for
107910433
ghi-r.1
for
107951520
sot-r.1
for
102595255
cit-r.1
for
102619190
nta-r.1
for
107820458
nta-r.1
for
107814835


Ortholog ID: 10745
Species tae tae hvu bdi osa zma sbi ath gma sly bra vvi ghi ghi sot cit nta nta
Symbol LOC123068715 LOC123077224 LOC123442758 LOC112268514 LOC4336394 LOC103646227 LOC8075929 AT3G09040 LOC100800995 LOC112940021 LOC103859314 LOC100257512 LOC107910433 LOC107951520 LOC102595255 LOC102619190 LOC107820458 LOC107814835
Function* pentatricopeptide repeat-containing protein At3g09040, mitochondrial pentatricopeptide repeat-containing protein At3g09040, mitochondrial pentatricopeptide repeat-containing protein At3g09040, mitochondrial-like pentatricopeptide repeat-containing protein At3g09040, mitochondrial pentatricopeptide repeat-containing protein At3g09040, mitochondrial pentatricopeptide repeat-containing protein At3g09040, mitochondrial pentatricopeptide repeat-containing protein At3g09040, mitochondrial Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g09040, mitochondrial pentatricopeptide repeat-containing protein At3g09040, mitochondrial pentatricopeptide repeat-containing protein At3g09040, mitochondrial pentatricopeptide repeat-containing protein At3g09040, mitochondrial pentatricopeptide repeat-containing protein At3g09040, mitochondrial pentatricopeptide repeat-containing protein At3g09040, mitochondrial pentatricopeptide repeat-containing protein At3g09040, mitochondrial pentatricopeptide repeat-containing protein At3g09040, mitochondrial pentatricopeptide repeat-containing protein At3g09040, mitochondrial-like pentatricopeptide repeat-containing protein At3g09040, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03430 Mismatch repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 3
sot00520 Amino sugar and nucleotide sugar metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123068715 123077224 123442758 112268514 4336394 103646227 8075929 820057 100800995 112940021 103859314 100257512 107910433 107951520 102595255 102619190 107820458 107814835
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