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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8075929   pentatricopeptide repeat-containing protein At3g09040, mitochondrial 
 zma-u.5   103646227   pentatricopeptide repeat-containing protein At3g09040, mitochondrial 
 osa-u.5   4336394   pentatricopeptide repeat-containing protein At3g09040, mitochondrial 
 ath-u.5   AT3G09040   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100800995   pentatricopeptide repeat-containing protein At3g09040, mitochondrial 
 sly-u.5   112940021   pentatricopeptide repeat-containing protein At3g09040, mitochondrial 
 vvi-u.5   100257512   pentatricopeptide repeat-containing protein At3g09040, mitochondrial 

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Top 50 coexpressed genes to 8075929 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8075929 (sbi-r.1 coexpression data)

CoexMap"8075929"


sbiLOC8075929 | Entrez gene ID : 8075929    
Species sbi zma osa ath gma sly vvi bra nta mtr cre hvu cit bdi ppo sot tae bna ghi
Paralog 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002448180.1 [sequence] [blastp]
XP_021318931.1 [sequence] [blastp]
XP_021318932.1 [sequence] [blastp]
XP_021318933.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_002448180.1)
chlo 5,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_021318931.1)
chlo 5,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_021318932.1)
chlo 5,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_021318933.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_002448180.1)
mito 6  (predict for XP_021318931.1)
mito 6  (predict for XP_021318932.1)
mito 6  (predict for XP_021318933.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8075929

.
zma-u.5
for
103646227

.
osa-u.5
for
4336394

.
ath-u.5
for
AT3G09040

.
gma-u.5
for
100800995

.
sly-u.5
for
112940021

.
vvi-u.5
for
100257512

.


Ortholog ID: 10745
Species ath gma sly osa zma bra vvi tae tae hvu ghi ghi sbi sot cit bdi nta nta
Symbol AT3G09040 LOC100800995 LOC112940021 LOC4336394 LOC103646227 LOC103859314 LOC100257512 LOC123068715 LOC123077224 LOC123442758 LOC107910433 LOC107951520 LOC8075929 LOC102595255 LOC102619190 LOC112268514 LOC107820458 LOC107814835
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g09040, mitochondrial pentatricopeptide repeat-containing protein At3g09040, mitochondrial pentatricopeptide repeat-containing protein At3g09040, mitochondrial pentatricopeptide repeat-containing protein At3g09040, mitochondrial pentatricopeptide repeat-containing protein At3g09040, mitochondrial pentatricopeptide repeat-containing protein At3g09040, mitochondrial pentatricopeptide repeat-containing protein At3g09040, mitochondrial pentatricopeptide repeat-containing protein At3g09040, mitochondrial pentatricopeptide repeat-containing protein At3g09040, mitochondrial-like pentatricopeptide repeat-containing protein At3g09040, mitochondrial pentatricopeptide repeat-containing protein At3g09040, mitochondrial pentatricopeptide repeat-containing protein At3g09040, mitochondrial pentatricopeptide repeat-containing protein At3g09040, mitochondrial pentatricopeptide repeat-containing protein At3g09040, mitochondrial pentatricopeptide repeat-containing protein At3g09040, mitochondrial pentatricopeptide repeat-containing protein At3g09040, mitochondrial-like pentatricopeptide repeat-containing protein At3g09040, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03430 Mismatch repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 3
sot00520 Amino sugar and nucleotide sugar metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820057 100800995 112940021 4336394 103646227 103859314 100257512 123068715 123077224 123442758 107910433 107951520 8075929 102595255 102619190 112268514 107820458 107814835
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