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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123060412   homeobox-DDT domain protein RLT3 
 tae-r.2   123077478   homeobox-DDT domain protein RLT3 
 tae-r.2   123187611   homeobox-DDT domain protein RLT3 
 tae-r.2   123051696   homeobox-DDT domain protein RLT3 
 hvu-r.1   123424846   homeobox-DDT domain protein RLT3-like 
 hvu-r.1   123442934   homeobox-DDT domain protein RLT3-like 
 bdi-r.1   100825161   homeobox-DDT domain protein RLT3 
 osa-u.5   4343927   homeobox-DDT domain protein RLT3 
 zma-u.5   103644204   homeobox-DDT domain protein RLT3 
 sbi-r.1   8061133   homeobox-DDT domain protein RLT3 
 ath-u.5   AT4G12750   Homeodomain-like transcriptional regulator 
 gma-u.5   100802783   homeobox-DDT domain protein RLT3 
 gma-u.5   100792062   homeobox-DDT domain protein RLT3 
 sly-u.5   101266687   homeobox-DDT domain protein RLT3 
 bra-r.6   103832849   homeobox-DDT domain protein RLT3 
 vvi-u.5   100241125   homeobox-DDT domain protein RLT3 
 ppo-u.5   7456034   homeobox-DDT domain protein RLT3 
 mtr-u.5   112417546   homeobox-DDT domain protein RLT3 
 ghi-r.1   107912490   homeobox-DDT domain protein RLT3 
 ghi-r.1   107923916   homeobox-DDT domain protein RLT3 
 bna-r.1   106360500   homeobox-DDT domain protein RLT3 
 bna-r.1   106427465   homeobox-DDT domain protein RLT3-like 
 sot-r.1   102601165   uncharacterized LOC102601165 
 cit-r.1   102620965   homeobox-DDT domain protein RLT3 
 nta-r.1   107766955   homeobox-DDT domain protein RLT3 
 nta-r.1   107793383   homeobox-DDT domain protein RLT3 

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Top 50 coexpressed genes to 123060412 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123060412 (tae-r.2 coexpression data)

CoexMap"123060412"


taeLOC123060412 | Entrez gene ID : 123060412    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 2 1 1 1 1 1 2 1 1 1 1 1 2 2 1 1 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (1094 genes)  IEA  
GO CC
GO MF
GO:0003677 [list] [network] DNA binding  (6662 genes)  IEA  
Protein XP_044339056.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_044339056.1)
Subcellular
localization
TargetP
other 8  (predict for XP_044339056.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123060412
tae-r.2
for
123077478
tae-r.2
for
123187611
tae-r.2
for
123051696
hvu-r.1
for
123424846
hvu-r.1
for
123442934
bdi-r.1
for
100825161
osa-u.5
for
4343927
zma-u.5
for
103644204
sbi-r.1
for
8061133
ath-u.5
for
AT4G12750
gma-u.5
for
100802783
gma-u.5
for
100792062
sly-u.5
for
101266687
bra-r.6
for
103832849
vvi-u.5
for
100241125
ppo-u.5
for
7456034
mtr-u.5
for
112417546
ghi-r.1
for
107912490
ghi-r.1
for
107923916
bna-r.1
for
106360500
bna-r.1
for
106427465
sot-r.1
for
102601165
cit-r.1
for
102620965
nta-r.1
for
107766955
nta-r.1
for
107793383


Ortholog ID: 8532
Species tae tae tae hvu hvu bdi osa zma sbi ath gma gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta
Symbol LOC123077478 LOC123187611 LOC123068944 LOC123424846 LOC123442934 LOC100825161 LOC4343927 LOC103644204 LOC8061133 AT4G12750 LOC100802783 LOC100792062 LOC101266687 LOC103832849 LOC100241125 LOC7456034 LOC112417546 LOC107912490 LOC107923916 LOC106360500 LOC106427465 LOC102601165 LOC102620965 LOC107766955 LOC107793383
Function* homeobox-DDT domain protein RLT3 homeobox-DDT domain protein RLT3 homeobox-DDT domain protein RLT3 homeobox-DDT domain protein RLT3-like homeobox-DDT domain protein RLT3-like homeobox-DDT domain protein RLT3 homeobox-DDT domain protein RLT3 homeobox-DDT domain protein RLT3 homeobox-DDT domain protein RLT3 Homeodomain-like transcriptional regulator homeobox-DDT domain protein RLT3 homeobox-DDT domain protein RLT3 homeobox-DDT domain protein RLT3 homeobox-DDT domain protein RLT3 homeobox-DDT domain protein RLT3 homeobox-DDT domain protein RLT3 homeobox-DDT domain protein RLT3 homeobox-DDT domain protein RLT3 homeobox-DDT domain protein RLT3 homeobox-DDT domain protein RLT3 homeobox-DDT domain protein RLT3-like uncharacterized LOC102601165 homeobox-DDT domain protein RLT3 homeobox-DDT domain protein RLT3 homeobox-DDT domain protein RLT3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 2
ghi00270 Cysteine and methionine metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 2
ghi00270 Cysteine and methionine metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123077478 123187611 123068944 123424846 123442934 100825161 4343927 103644204 8061133 826887 100802783 100792062 101266687 103832849 100241125 7456034 112417546 107912490 107923916 106360500 106427465 102601165 102620965 107766955 107793383
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