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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123061045   la-related protein 1A 
 tae-r.2   123069636   la-related protein 1A 
 tae-r.2   123078115   la-related protein 1A 
 hvu-r.1   123443470   la-related protein 1A 
 bdi-r.1   100821192   la-related protein 1A 
 osa-u.5   4324370   la-related protein 1A 
 zma-u.5   100193028   uncharacterized LOC100193028 
 sbi-r.1   8074507   la-related protein 1A 
 ath-u.5   LARP1a   LA RNA-binding protein 
 gma-u.5   100813202   la-related protein 1A 
 gma-u.5   100780505   la-related protein 1A 
 sly-u.5   101245852   la-related protein 1A 
 bra-r.6   103851404   la-related protein 1A 
 bra-r.6   103845604   la-related protein 1A 
 vvi-u.5   100254731   la-related protein 1A 
 vvi-u.5   100258658   la-related protein 1A 
 ppo-u.5   7489321   la-related protein 1A 
 ppo-u.5   7467966   la-related protein 1A 
 mtr-u.5   11435207   la-related protein 1A 
 ghi-r.1   107906204   la-related protein 1A 
 ghi-r.1   107963865   la-related protein 1A 
 ghi-r.1   107959044   la-related protein 1A 
 bna-r.1   106371688   la-related protein 1A 
 bna-r.1   106384884   la-related protein 1A-like 
 bna-r.1   106421359   la-related protein 1A 
 sot-r.1   102590409   la-related protein 1A 
 cit-r.1   102621746   la-related protein 1A 
 nta-r.1   107784198   la-related protein 1A 
 nta-r.1   107770309   la-related protein 1A 
 cre-r.1   CHLRE_10g441200v5   uncharacterized protein 

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Top 50 coexpressed genes to 123061045 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123061045 (tae-r.2 coexpression data)

CoexMap"123061045"


taeLOC123061045 | Entrez gene ID : 123061045    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 1 1 1 1 2 1 2 2 2 1 3 3 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0048255 [list] [network] mRNA stabilization  (3 genes)  IEA  
GO:0006396 [list] [network] RNA processing  (1836 genes)  IEA  
GO CC
GO:1990904 [list] [network] ribonucleoprotein complex  (1478 genes)  IEA  
GO:0005634 [list] [network] nucleus  (8281 genes)  IEA  
GO MF
GO:0000339 [list] [network] RNA cap binding  (19 genes)  IEA  
Protein XP_044339882.1 [sequence] [blastp]
XP_044339883.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_044339882.1)
nucl 10  (predict for XP_044339883.1)
Subcellular
localization
TargetP
other 8  (predict for XP_044339882.1)
other 8  (predict for XP_044339883.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123061045
tae-r.2
for
123069636
tae-r.2
for
123078115
hvu-r.1
for
123443470
bdi-r.1
for
100821192
osa-u.5
for
4324370
zma-u.5
for
100193028
sbi-r.1
for
8074507
ath-u.5
for
LARP1a
gma-u.5
for
100813202
gma-u.5
for
100780505
sly-u.5
for
101245852
bra-r.6
for
103851404
bra-r.6
for
103845604
vvi-u.5
for
100254731
vvi-u.5
for
100258658
ppo-u.5
for
7489321
ppo-u.5
for
7467966
mtr-u.5
for
11435207
ghi-r.1
for
107906204
ghi-r.1
for
107963865
ghi-r.1
for
107959044
bna-r.1
for
106371688
bna-r.1
for
106384884
bna-r.1
for
106421359
sot-r.1
for
102590409
cit-r.1
for
102621746
nta-r.1
for
107784198
nta-r.1
for
107770309
cre-r.1
for
CHLRE_10g441200v5


Ortholog ID: 7346
Species tae tae tae hvu bdi osa zma sbi ath gma gma sly bra bra vvi vvi ppo ppo mtr ghi ghi ghi bna bna bna sot cit nta nta cre
Symbol LOC123061045 LOC123069636 LOC123078115 LOC123443470 LOC100821192 LOC4324370 LOC100193028 LOC8074507 LARP1a LOC100813202 LOC100780505 LOC101245852 LOC103851404 LOC103845604 LOC100254731 LOC100258658 LOC7489321 LOC7467966 LOC11435207 LOC107906204 LOC107959044 LOC107943087 LOC106371688 LOC106384884 LOC106421359 LOC102590409 LOC102621746 LOC107784198 LOC107770309 CHLRE_10g441200v5
Function* la-related protein 1A la-related protein 1A la-related protein 1A la-related protein 1A la-related protein 1A la-related protein 1A uncharacterized LOC100193028 la-related protein 1A LA RNA-binding protein la-related protein 1A la-related protein 1A la-related protein 1A la-related protein 1A la-related protein 1A la-related protein 1A la-related protein 1A la-related protein 1A la-related protein 1A la-related protein 1A la-related protein 1A la-related protein 1A la-related protein 1A la-related protein 1A la-related protein 1A-like la-related protein 1A la-related protein 1A la-related protein 1A la-related protein 1A la-related protein 1A uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae03030 DNA replication 3
tae03410 Base excision repair 3
tae03420 Nucleotide excision repair 3
tae03430 Mismatch repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 5
hvu03013 Nucleocytoplasmic transport 4
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 5
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 4
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 4
ath00970 Aminoacyl-tRNA biosynthesis 2
ath03040 Spliceosome 2
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
gma00020 Citrate cycle (TCA cycle) 2
gma00785 Lipoic acid metabolism 2
gma01200 Carbon metabolism 2
gma01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 2
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
bra03013 Nucleocytoplasmic transport 2
bra03015 mRNA surveillance pathway 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 3
vvi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
ghi04626 Plant-pathogen interaction 2
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
ghi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
bna00450 Selenocompound metabolism 2
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00450 Selenocompound metabolism 3
bna00970 Aminoacyl-tRNA biosynthesis 3
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 7
bna00450 Selenocompound metabolism 3
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 3
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
nta03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123061045 123069636 123078115 123443470 100821192 4324370 100193028 8074507 832242 100813202 100780505 101245852 103851404 103845604 100254731 100258658 7489321 7467966 11435207 107906204 107959044 107943087 106371688 106384884 106421359 102590409 102621746 107784198 107770309 5716139
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