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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4339346   nuclear pore complex protein NUP35 
 osa-u.5   4327063   nuclear pore complex protein NUP35 
 zma-u.5   100194358   uncharacterized LOC100194358 
 zma-u.5   100216910   Nuclear pore complex protein NUP35 
 zma-u.5   100285840   MPPN domain containing protein 
 ath-u.5   AT3G16310   mitotic phosphoprotein N' end (MPPN) family protein 
 gma-u.5   100783752   uncharacterized LOC100783752 
 gma-u.5   100803145   nuclear pore complex protein NUP35 
 sly-u.5   101258447   nuclear pore complex protein NUP35 
 vvi-u.5   100244686   nuclear pore complex protein NUP35 
 ppo-u.5   7475094   nuclear pore complex protein NUP35 
 mtr-u.5   11441996   nuclear pore complex protein NUP35 

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Top 50 coexpressed genes to 4339346 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4339346 (osa-u.5 coexpression data)

CoexMap"123065609"


taeLOC123065609 | Entrez gene ID : 123065609    
Species osa zma ath gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 3 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes03013 [list] [network] Nucleocytoplasmic transport (365 genes)
GO BP
GO:0006607 [list] [network] NLS-bearing protein import into nucleus  (11 genes)  IEA  
GO:0006999 [list] [network] nuclear pore organization  (14 genes)  IEA  
GO CC
GO:0044615 [list] [network] nuclear pore nuclear basket  (8 genes)  IEA  
GO:0044613 [list] [network] nuclear pore central transport channel  (14 genes)  IEA  
GO:0031965 [list] [network] nuclear membrane  (20 genes)  IEA  
GO MF
GO:0017056 [list] [network] structural constituent of nuclear pore  (64 genes)  IEA  
GO:0005543 [list] [network] phospholipid binding  (376 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (11810 genes)  IEA  
Protein XP_044344790.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  mito 1  (predict for XP_044344790.1)
Subcellular
localization
TargetP
chlo 5  (predict for XP_044344790.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4339346

.
osa-u.5
for
4327063

.
zma-u.5
for
100194358

.
zma-u.5
for
100216910

.
zma-u.5
for
100285840

.
ath-u.5
for
AT3G16310

.
gma-u.5
for
100783752

.
gma-u.5
for
100803145

.
sly-u.5
for
101258447

.
vvi-u.5
for
100244686

.
ppo-u.5
for
7475094

.
mtr-u.5
for
11441996

.


Ortholog ID: 5996
Species ath gma gma sly osa osa zma zma bra vvi ppo mtr tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT3G16310 LOC100803145 LOC100783752 LOC101258447 LOC4339346 LOC4327063 LOC100194358 LOC100216910 LOC103869835 LOC100244686 LOC7475094 LOC11441996 LOC123069184 LOC123443114 LOC107950618 LOC121208615 LOC106452137 LOC106452216 CHLRE_12g553050v5 LOC8080518 LOC102582355 LOC102630379 LOC100842837 LOC107795254 LOC107792807
Function* mitotic phosphoprotein N' end (MPPN) family protein nuclear pore complex protein NUP35 uncharacterized LOC100783752 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 uncharacterized LOC100194358 Nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 uncharacterized protein nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 5
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
gma03013 Nucleocytoplasmic transport 2
gma00230 Purine metabolism 2
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 6
gma03410 Base excision repair 5
gma03420 Nucleotide excision repair 5
gma03430 Mismatch repair 5
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly03013 Nucleocytoplasmic transport 2
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 5
osa03040 Spliceosome 3
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 3
zma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
ppo03013 Nucleocytoplasmic transport 2
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 8
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04814 Motor proteins 5
ghi00541 Biosynthesis of various nucleotide sugars 2
ghi01250 Biosynthesis of nucleotide sugars 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 6
bna03015 mRNA surveillance pathway 4
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 6
bna03015 mRNA surveillance pathway 4
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
bdi03040 Spliceosome 2
bdi04141 Protein processing in endoplasmic reticulum 2
bdi03020 RNA polymerase 2
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta03008 Ribosome biogenesis in eukaryotes 2
nta03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820878 100803145 100783752 101258447 4339346 4327063 100194358 100216910 103869835 100244686 7475094 11441996 123069184 123443114 107950618 121208615 106452137 106452216 5719696 8080518 102582355 102630379 100842837 107795254 107792807
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