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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123069658   DNA gyrase subunit B, chloroplastic/mitochondrial 
 osa-u.5   4326261   DNA gyrase subunit B, chloroplastic/mitochondrial-like 
 zma-u.5   100382343   DNA gyrase subunit B mitochondrial 
 ath-u.5   GYRB1   DNA gyrase subunit B 
 ath-u.5   GYRB2   DNA GYRASE B2 
 gma-u.5   100807172   DNA gyrase subunit B, chloroplastic/mitochondrial 
 gma-u.5   100779534   DNA gyrase subunit B, chloroplastic/mitochondrial 
 sly-u.5   101250576   DNA gyrase subunit B, chloroplastic/mitochondrial 
 vvi-u.5   100241769   DNA gyrase subunit B, chloroplastic/mitochondrial 
 ppo-u.5   7496079   DNA gyrase subunit B, chloroplastic/mitochondrial 
 ppo-u.5   7458923   DNA gyrase subunit B, chloroplastic/mitochondrial 
 mtr-u.5   11427804   DNA gyrase subunit B, chloroplastic/mitochondrial 

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Top 50 coexpressed genes to 123069658 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123069658 (tae-r.2 coexpression data)

CoexMap"123069658"


taeLOC123069658 | Entrez gene ID : 123069658    
Species tae osa zma ath gma sly vvi ppo mtr bdi hvu bra cit bna sbi ghi sot nta cre
Paralog 1 1 1 2 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006265 [list] [network] DNA topological change  (48 genes)  IEA  
GO CC
GO:0005694 [list] [network] chromosome  (1392 genes)  IEA  
GO MF
GO:0003918 [list] [network] DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity  (42 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (6662 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (7858 genes)  IEA  
Protein XP_044348513.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 5,  mito 4  (predict for XP_044348513.1)
Subcellular
localization
TargetP
chlo 8,  mito 6  (predict for XP_044348513.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123069658
osa-u.5
for
4326261
zma-u.5
for
100382343
ath-u.5
for
GYRB1
ath-u.5
for
GYRB2
gma-u.5
for
100807172
gma-u.5
for
100779534
sly-u.5
for
101250576
vvi-u.5
for
100241769
ppo-u.5
for
7496079
ppo-u.5
for
7458923
mtr-u.5
for
11427804


Ortholog ID: 6864
Species tae tae hvu bdi osa zma sbi ath ath gma gma sly bra bra vvi ppo ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC123061067 LOC123069658 LOC123443487 LOC100826125 LOC4326261 LOC100382343 LOC8074515 GYRB2 GYRB1 LOC100807172 LOC100779534 LOC101250576 LOC103870478 LOC103850536 LOC100241769 LOC7458923 LOC7496079 LOC11427804 LOC107949489 LOC107951801 LOC106441338 LOC106452670 LOC102597444 LOC102614049 LOC107830362 LOC107786139 CHLRE_10g440750v5
Function* DNA gyrase subunit B, chloroplastic/mitochondrial DNA gyrase subunit B, chloroplastic/mitochondrial DNA gyrase subunit B, chloroplastic/mitochondrial DNA gyrase subunit B, chloroplastic/mitochondrial DNA gyrase subunit B, chloroplastic/mitochondrial-like DNA gyrase subunit B mitochondrial DNA gyrase subunit B, chloroplastic/mitochondrial DNA GYRASE B2 DNA gyrase subunit B DNA gyrase subunit B, chloroplastic/mitochondrial DNA gyrase subunit B, chloroplastic/mitochondrial DNA gyrase subunit B, chloroplastic/mitochondrial DNA gyrase subunit B, chloroplastic DNA gyrase subunit B, mitochondrial DNA gyrase subunit B, chloroplastic/mitochondrial DNA gyrase subunit B, chloroplastic/mitochondrial DNA gyrase subunit B, chloroplastic/mitochondrial DNA gyrase subunit B, chloroplastic/mitochondrial DNA gyrase subunit B, chloroplastic/mitochondrial DNA gyrase subunit B, chloroplastic/mitochondrial DNA gyrase subunit B, mitochondrial DNA gyrase subunit B, chloroplastic DNA gyrase subunit B, chloroplastic/mitochondrial DNA gyrase subunit B, chloroplastic/mitochondrial-like DNA gyrase subunit B, chloroplastic/mitochondrial DNA gyrase subunit B, chloroplastic/mitochondrial uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 3
tae00290 Valine, leucine and isoleucine biosynthesis 2
tae00770 Pantothenate and CoA biosynthesis 2
tae01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04146 Peroxisome 2
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
gma00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 3
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 4
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
nta00260 Glycine, serine and threonine metabolism 2
nta00261 Monobactam biosynthesis 2
nta00270 Cysteine and methionine metabolism 2
nta00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00260 Glycine, serine and threonine metabolism 2
nta00261 Monobactam biosynthesis 2
nta00270 Cysteine and methionine metabolism 2
nta00300 Lysine biosynthesis 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 6
cre03410 Base excision repair 4
cre03420 Nucleotide excision repair 3
cre03430 Mismatch repair 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123061067 123069658 123443487 100826125 4326261 100382343 8074515 830291 820189 100807172 100779534 101250576 103870478 103850536 100241769 7458923 7496079 11427804 107949489 107951801 106441338 106452670 102597444 102614049 107830362 107786139 5716144
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