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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123078143   DNA gyrase subunit B, chloroplastic/mitochondrial 
 tae-r.2   123061067   DNA gyrase subunit B, chloroplastic/mitochondrial 
 tae-r.2   123069658   DNA gyrase subunit B, chloroplastic/mitochondrial 
 hvu-r.1   123443487   DNA gyrase subunit B, chloroplastic/mitochondrial 
 bdi-r.1   100826125   DNA gyrase subunit B, chloroplastic/mitochondrial 
 osa-u.5   4326261   DNA gyrase subunit B, chloroplastic/mitochondrial-like 
 zma-u.5   100382343   DNA gyrase subunit B mitochondrial 
 sbi-r.1   8074515   DNA gyrase subunit B, chloroplastic/mitochondrial 
 ath-u.5   GYRB1   DNA gyrase subunit B 
 ath-u.5   GYRB2   DNA GYRASE B2 
 gma-u.5   100807172   DNA gyrase subunit B, chloroplastic/mitochondrial 
 gma-u.5   100779534   DNA gyrase subunit B, chloroplastic/mitochondrial 
 sly-u.5   101250576   DNA gyrase subunit B, chloroplastic/mitochondrial 
 bra-r.6   103870478   DNA gyrase subunit B, chloroplastic 
 bra-r.6   103856825   DNA gyrase subunit B, mitochondrial 
 bra-r.6   103850536   DNA gyrase subunit B, mitochondrial 
 vvi-u.5   100241769   DNA gyrase subunit B, chloroplastic/mitochondrial 
 ppo-u.5   7496079   DNA gyrase subunit B, chloroplastic/mitochondrial 
 ppo-u.5   7458923   DNA gyrase subunit B, chloroplastic/mitochondrial 
 mtr-u.5   11427804   DNA gyrase subunit B, chloroplastic/mitochondrial 
 ghi-r.1   107951801   DNA gyrase subunit B, chloroplastic/mitochondrial 
 ghi-r.1   107949489   DNA gyrase subunit B, chloroplastic/mitochondrial 
 bna-r.1   106452670   DNA gyrase subunit B, chloroplastic 
 bna-r.1   106441338   DNA gyrase subunit B, mitochondrial 
 bna-r.1   106425334   DNA gyrase subunit B, mitochondrial 
 sot-r.1   102597444   DNA gyrase subunit B, chloroplastic/mitochondrial 
 cit-r.1   102614049   DNA gyrase subunit B, chloroplastic/mitochondrial-like 
 nta-r.1   107830362   DNA gyrase subunit B, chloroplastic/mitochondrial 
 nta-r.1   107786139   DNA gyrase subunit B, chloroplastic/mitochondrial 
 cre-r.1   CHLRE_10g440750v5   uncharacterized protein 

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Top 50 coexpressed genes to 123078143 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123078143 (tae-r.2 coexpression data)

CoexMap"123078143"


taeLOC123078143 | Entrez gene ID : 123078143    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 1 1 1 2 2 1 3 1 2 1 2 3 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006265 [list] [network] DNA topological change  (48 genes)  IEA  
GO CC
GO:0005694 [list] [network] chromosome  (1392 genes)  IEA  
GO MF
GO:0003918 [list] [network] DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity  (42 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (6662 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (7858 genes)  IEA  
Protein XP_044356479.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 5,  mito 3  (predict for XP_044356479.1)
Subcellular
localization
TargetP
chlo 8,  mito 6  (predict for XP_044356479.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123078143
tae-r.2
for
123061067
tae-r.2
for
123069658
hvu-r.1
for
123443487
bdi-r.1
for
100826125
osa-u.5
for
4326261
zma-u.5
for
100382343
sbi-r.1
for
8074515
ath-u.5
for
GYRB1
ath-u.5
for
GYRB2
gma-u.5
for
100807172
gma-u.5
for
100779534
sly-u.5
for
101250576
bra-r.6
for
103870478
bra-r.6
for
103856825
bra-r.6
for
103850536
vvi-u.5
for
100241769
ppo-u.5
for
7496079
ppo-u.5
for
7458923
mtr-u.5
for
11427804
ghi-r.1
for
107951801
ghi-r.1
for
107949489
bna-r.1
for
106452670
bna-r.1
for
106441338
bna-r.1
for
106425334
sot-r.1
for
102597444
cit-r.1
for
102614049
nta-r.1
for
107830362
nta-r.1
for
107786139
cre-r.1
for
CHLRE_10g440750v5


Ortholog ID: 6864
Species tae tae tae hvu bdi osa zma sbi ath ath gma gma sly bra bra bra vvi ppo ppo mtr ghi ghi bna bna bna sot cit nta nta cre
Symbol LOC123078143 LOC123061067 LOC123069658 LOC123443487 LOC100826125 LOC4326261 LOC100382343 LOC8074515 GYRB1 GYRB2 LOC100807172 LOC100779534 LOC101250576 LOC103870478 LOC103856825 LOC103850536 LOC100241769 LOC7496079 LOC7458923 LOC11427804 LOC107951801 LOC107949489 LOC106452670 LOC106441338 LOC125587914 LOC102597444 LOC102614049 LOC107830362 LOC107786139 CHLRE_10g440750v5
Function* DNA gyrase subunit B, chloroplastic/mitochondrial DNA gyrase subunit B, chloroplastic/mitochondrial DNA gyrase subunit B, chloroplastic/mitochondrial DNA gyrase subunit B, chloroplastic/mitochondrial DNA gyrase subunit B, chloroplastic/mitochondrial DNA gyrase subunit B, chloroplastic/mitochondrial-like DNA gyrase subunit B mitochondrial DNA gyrase subunit B, chloroplastic/mitochondrial DNA gyrase subunit B DNA GYRASE B2 DNA gyrase subunit B, chloroplastic/mitochondrial DNA gyrase subunit B, chloroplastic/mitochondrial DNA gyrase subunit B, chloroplastic/mitochondrial DNA gyrase subunit B, chloroplastic DNA gyrase subunit B, mitochondrial DNA gyrase subunit B, mitochondrial DNA gyrase subunit B, chloroplastic/mitochondrial DNA gyrase subunit B, chloroplastic/mitochondrial DNA gyrase subunit B, chloroplastic/mitochondrial DNA gyrase subunit B, chloroplastic/mitochondrial DNA gyrase subunit B, chloroplastic/mitochondrial DNA gyrase subunit B, chloroplastic/mitochondrial DNA gyrase subunit B, chloroplastic DNA gyrase subunit B, mitochondrial DNA gyrase subunit B, chloroplastic DNA gyrase subunit B, chloroplastic/mitochondrial DNA gyrase subunit B, chloroplastic/mitochondrial-like DNA gyrase subunit B, chloroplastic/mitochondrial DNA gyrase subunit B, chloroplastic/mitochondrial uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 3
tae00290 Valine, leucine and isoleucine biosynthesis 2
tae00770 Pantothenate and CoA biosynthesis 2
tae01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 3
tae00290 Valine, leucine and isoleucine biosynthesis 2
tae00770 Pantothenate and CoA biosynthesis 2
tae01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04146 Peroxisome 2
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
gma00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 4
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 3
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
nta00260 Glycine, serine and threonine metabolism 2
nta00261 Monobactam biosynthesis 2
nta00270 Cysteine and methionine metabolism 2
nta00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00260 Glycine, serine and threonine metabolism 2
nta00261 Monobactam biosynthesis 2
nta00270 Cysteine and methionine metabolism 2
nta00300 Lysine biosynthesis 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 6
cre03410 Base excision repair 4
cre03420 Nucleotide excision repair 3
cre03430 Mismatch repair 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123078143 123061067 123069658 123443487 100826125 4326261 100382343 8074515 820189 830291 100807172 100779534 101250576 103870478 103856825 103850536 100241769 7496079 7458923 11427804 107951801 107949489 106452670 106441338 125587914 102597444 102614049 107830362 107786139 5716144
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