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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123070192   protein RAE1 
 osa-u.5   4344798   protein RAE1 
 osa-u.5   4326570   protein RAE1 
 zma-u.5   100283675   rae1-like protein 
 zma-u.5   100286267   rae1-like protein 
 ath-u.5   RAE1   Transducin/WD40 repeat-like superfamily protein 
 gma-u.5   100819240   putative mRNA export factor 
 gma-u.5   100803005   protein RAE1 
 gma-u.5   100780721   rae1-like protein At1g80670-like 
 sly-u.5   101247869   protein RAE1 
 vvi-u.5   100250245   protein RAE1 
 vvi-u.5   100250787   protein RAE1 
 ppo-u.5   7478293   protein RAE1 
 ppo-u.5   7490684   protein RAE1 
 mtr-u.5   11428530   protein RAE1 
 mtr-u.5   25501437   protein RAE1 

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Top 50 coexpressed genes to 123070192 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123070192 (tae-r.2 coexpression data)

CoexMap"123070192"


taeLOC123070192 | Entrez gene ID : 123070192    
Species tae osa zma ath gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot bna ghi
Paralog 1 2 2 1 3 1 2 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes03013 [list] [network] Nucleocytoplasmic transport (365 genes)
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044349196.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  chlo 4  (predict for XP_044349196.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_044349196.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123070192

.
osa-u.5
for
4344798

.
osa-u.5
for
4326570

.
zma-u.5
for
100283675

.
zma-u.5
for
100286267

.
ath-u.5
for
RAE1

.
gma-u.5
for
100819240

.
gma-u.5
for
100803005

.
gma-u.5
for
100780721

.
sly-u.5
for
101247869

.
vvi-u.5
for
100250245

.
vvi-u.5
for
100250787

.
ppo-u.5
for
7478293

.
ppo-u.5
for
7490684

.
mtr-u.5
for
11428530

.
mtr-u.5
for
25501437

.


Ortholog ID: 4017
Species ath gma gma sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot bdi bdi nta nta
Symbol RAE1 LOC100819240 LOC100527204 LOC101247869 LOC4326570 LOC4344798 LOC100283675 LOC100286267 LOC103832465 LOC103853226 LOC100250245 LOC100250787 LOC7478293 LOC7490684 LOC11428530 LOC25501437 LOC123104522 LOC123061557 LOC123443201 LOC123443939 LOC107906437 LOC107958446 LOC106396744 LOC106354833 CHLRE_06g278097v5 LOC8058208 LOC110437059 LOC102590604 LOC100830773 LOC100846303 LOC107825929 LOC107767524
Function* Transducin/WD40 repeat-like superfamily protein putative mRNA export factor protein RAE1 protein RAE1 protein RAE1 protein RAE1 rae1-like protein rae1-like protein protein RAE1 protein RAE1 protein RAE1 protein RAE1 protein RAE1 protein RAE1 protein RAE1 protein RAE1 protein RAE1 protein RAE1 protein RAE1 protein RAE1-like protein RAE1 protein RAE1 protein RAE1 protein RAE1 uncharacterized protein protein RAE1 protein RAE1 protein RAE1 protein RAE1 protein RAE1 protein RAE1-like protein RAE1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 7
ath03008 Ribosome biogenesis in eukaryotes 4
ath03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
gma00510 N-Glycan biosynthesis 6
gma04141 Protein processing in endoplasmic reticulum 6
gma00513 Various types of N-glycan biosynthesis 5
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 4
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 4
osa03010 Ribosome 3
osa03410 Base excision repair 2
osa03420 Nucleotide excision repair 2
osa03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 3
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 4
zma03022 Basal transcription factors 2
zma03420 Nucleotide excision repair 2
zma04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 4
zma03008 Ribosome biogenesis in eukaryotes 3
zma03250 Viral life cycle - HIV-1 3
zma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
ppo03013 Nucleocytoplasmic transport 3
ppo00061 Fatty acid biosynthesis 2
ppo03040 Spliceosome 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03013 Nucleocytoplasmic transport 3
ppo03010 Ribosome 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04130 SNARE interactions in vesicular transport 3
mtr04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 11
tae03008 Ribosome biogenesis in eukaryotes 5
tae03250 Viral life cycle - HIV-1 5
tae03030 DNA replication 2
tae03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 8
ghi03008 Ribosome biogenesis in eukaryotes 6
ghi03250 Viral life cycle - HIV-1 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 8
ghi03008 Ribosome biogenesis in eukaryotes 6
ghi03250 Viral life cycle - HIV-1 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 14
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 8
cre03013 Nucleocytoplasmic transport 4
cre03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 4
sbi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 5
sot03040 Spliceosome 3
sot03008 Ribosome biogenesis in eukaryotes 3
sot03250 Viral life cycle - HIV-1 3
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 2
bdi03015 mRNA surveillance pathway 2
bdi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 6
bdi01200 Carbon metabolism 3
bdi01230 Biosynthesis of amino acids 2
bdi00620 Pyruvate metabolism 2
bdi00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 6
nta03008 Ribosome biogenesis in eukaryotes 4
nta03250 Viral life cycle - HIV-1 4
nta00190 Oxidative phosphorylation 2
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 6
nta03008 Ribosome biogenesis in eukaryotes 4
nta03250 Viral life cycle - HIV-1 4
nta00230 Purine metabolism 2
nta00920 Sulfur metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844406 100819240 100527204 101247869 4326570 4344798 100283675 100286267 103832465 103853226 100250245 100250787 7478293 7490684 11428530 25501437 123104522 123061557 123443201 123443939 107906437 107958446 106396744 106354833 5723672 8058208 110437059 102590604 100830773 100846303 107825929 107767524
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