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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123072608   eukaryotic translation initiation factor 3 subunit M 
 tae-r.2   123043265   eukaryotic translation initiation factor 3 subunit M 
 tae-r.2   123142484   uncharacterized LOC123142484 
 tae-r.2   123051130   eukaryotic translation initiation factor 3 subunit M 
 hvu-r.1   123424423   eukaryotic translation initiation factor 3 subunit M-like 
 bdi-r.1   100840385   eukaryotic translation initiation factor 3 subunit M 
 osa-u.5   4334895   eukaryotic translation initiation factor 3 subunit M 
 zma-u.5   100282333   uncharacterized LOC100282333 
 sbi-r.1   8068627   eukaryotic translation initiation factor 3 subunit M 
 ath-u.5   AT3G02200   Proteasome component (PCI) domain protein 
 ath-u.5   AT5G15610   Proteasome component (PCI) domain protein 
 gma-u.5   100811263   eukaryotic translation initiation factor 3 subunit M 
 gma-u.5   100786194   eukaryotic translation initiation factor 3 subunit M-like 
 gma-u.5   100788645   eukaryotic translation initiation factor 3 subunit M-like 
 sly-u.5   101255548   uncharacterized LOC101255548 
 bra-r.6   103858947   eukaryotic translation initiation factor 3 subunit M 
 bra-r.6   103870927   eukaryotic translation initiation factor 3 subunit M 
 bra-r.6   108868761   F-box protein At4g22390 
 vvi-u.5   100251424   uncharacterized LOC100251424 
 ppo-u.5   18097693   uncharacterized LOC18097693 
 ppo-u.5   7484580   uncharacterized LOC7484580 
 mtr-u.5   25499014   eukaryotic translation initiation factor 3 subunit M 
 mtr-u.5   25495361   eukaryotic translation initiation factor 3 subunit M 
 ghi-r.1   107939130   eukaryotic translation initiation factor 3 subunit M 
 ghi-r.1   107937165   eukaryotic translation initiation factor 3 subunit M 
 ghi-r.1   107959748   eukaryotic translation initiation factor 3 subunit M 
 bna-r.1   106384121   eukaryotic translation initiation factor 3 subunit M-like 
 bna-r.1   106382873   eukaryotic translation initiation factor 3 subunit M 
 bna-r.1   106432581   F-box protein At4g22390-like 
 sot-r.1   102578354   eukaryotic translation initiation factor 3 subunit M-like 
 cit-r.1   102613977   uncharacterized LOC102613977 
 nta-r.1   107781598   uncharacterized LOC107781598 
 nta-r.1   107788656   uncharacterized LOC107788656 
 nta-r.1   107799143   uncharacterized LOC107799143 
 cre-r.1   CHLRE_09g417200v5   uncharacterized protein 

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Top 50 coexpressed genes to 123072608 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123072608 (tae-r.2 coexpression data)

CoexMap"123072608"


taeLOC123072608 | Entrez gene ID : 123072608    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 1 1 1 1 1 2 3 1 3 1 2 2 3 3 1 1 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0002183 [list] [network] cytoplasmic translational initiation  (58 genes)  IEA  
GO CC
GO:0005852 [list] [network] eukaryotic translation initiation factor 3 complex  (64 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (13575 genes)  IEA  
GO MF
GO:0003743 [list] [network] translation initiation factor activity  (201 genes)  IEA  
Protein XP_044352129.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 2,  nucl 1,  vacu 1  (predict for XP_044352129.1)
Subcellular
localization
TargetP
other 6  (predict for XP_044352129.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123072608
tae-r.2
for
123043265
tae-r.2
for
123142484
tae-r.2
for
123051130
hvu-r.1
for
123424423
bdi-r.1
for
100840385
osa-u.5
for
4334895
zma-u.5
for
100282333
sbi-r.1
for
8068627
ath-u.5
for
AT3G02200
ath-u.5
for
AT5G15610
gma-u.5
for
100811263
gma-u.5
for
100786194
gma-u.5
for
100788645
sly-u.5
for
101255548
bra-r.6
for
103858947
bra-r.6
for
103870927
bra-r.6
for
108868761
vvi-u.5
for
100251424
ppo-u.5
for
18097693
ppo-u.5
for
7484580
mtr-u.5
for
25499014
mtr-u.5
for
25495361
ghi-r.1
for
107939130
ghi-r.1
for
107937165
ghi-r.1
for
107959748
bna-r.1
for
106384121
bna-r.1
for
106382873
bna-r.1
for
106432581
sot-r.1
for
102578354
cit-r.1
for
102613977
nta-r.1
for
107781598
nta-r.1
for
107788656
nta-r.1
for
107799143
cre-r.1
for
CHLRE_09g417200v5


Ortholog ID: 3578
Species tae tae tae hvu bdi osa zma sbi ath ath gma gma gma sly bra bra bra vvi ppo ppo mtr mtr ghi ghi ghi bna bna bna sot cit nta nta nta cre
Symbol LOC123072608 LOC123142484 LOC123080796 LOC123424423 LOC100840385 LOC4334895 LOC100282333 LOC8068627 AT3G02200 AT5G15610 LOC100811263 LOC100786194 LOC100788645 LOC101255548 LOC103858947 LOC103870927 LOC108868761 LOC100251424 LOC18097693 LOC7484580 LOC25499014 LOC25495361 LOC107939130 LOC107937165 LOC107959748 LOC106382873 LOC106404135 LOC106438921 LOC102578354 LOC102613977 LOC107799143 LOC107801165 LOC107815465 CHLRE_09g417200v5
Function* eukaryotic translation initiation factor 3 subunit M uncharacterized LOC123142484 eukaryotic translation initiation factor 3 subunit M eukaryotic translation initiation factor 3 subunit M-like eukaryotic translation initiation factor 3 subunit M eukaryotic translation initiation factor 3 subunit M uncharacterized LOC100282333 eukaryotic translation initiation factor 3 subunit M Proteasome component (PCI) domain protein Proteasome component (PCI) domain protein eukaryotic translation initiation factor 3 subunit M eukaryotic translation initiation factor 3 subunit M-like eukaryotic translation initiation factor 3 subunit M-like uncharacterized LOC101255548 eukaryotic translation initiation factor 3 subunit M eukaryotic translation initiation factor 3 subunit M F-box protein At4g22390 uncharacterized LOC100251424 uncharacterized LOC18097693 uncharacterized LOC7484580 eukaryotic translation initiation factor 3 subunit M eukaryotic translation initiation factor 3 subunit M eukaryotic translation initiation factor 3 subunit M eukaryotic translation initiation factor 3 subunit M eukaryotic translation initiation factor 3 subunit M eukaryotic translation initiation factor 3 subunit M LRR receptor-like serine/threonine-protein kinase RPK2 eukaryotic translation initiation factor 3 subunit M-like eukaryotic translation initiation factor 3 subunit M-like uncharacterized LOC102613977 uncharacterized LOC107799143 uncharacterized LOC107801165 uncharacterized LOC107815465 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi03013 Nucleocytoplasmic transport 2
bdi03015 mRNA surveillance pathway 2
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 9
osa00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 10
sbi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 10
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 5
bra03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 4
bra00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 7
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
ppo03420 Nucleotide excision repair 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 4
mtr00970 Aminoacyl-tRNA biosynthesis 3
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 2
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 8
cit00020 Citrate cycle (TCA cycle) 3
cit01200 Carbon metabolism 3
cit00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 4
nta03010 Ribosome 3
nta04141 Protein processing in endoplasmic reticulum 2
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta03420 Nucleotide excision repair 3
nta03020 RNA polymerase 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123072608 123142484 123080796 123424423 100840385 4334895 100282333 8068627 821267 831413 100811263 100786194 100788645 101255548 103858947 103870927 108868761 100251424 18097693 7484580 25499014 25495361 107939130 107937165 107959748 106382873 106404135 106438921 102578354 102613977 107799143 107801165 107815465 5722405
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