ATTED-II : GeneCoexpression result

Species	Gene	Description
zma-u.5	103649916	transcription factor bHLH110
ath-u.5	AT1G27660	basic helix-loop-helix (bHLH) DNA-binding superfamily protein
gma-u.5	100782565	transcription factor bHLH111
sly-u.5	101267521	transcription factor bHLH110
vvi-u.5	100260944	transcription factor bHLH110
ppo-u.5	7479726	transcription factor bHLH110
ppo-u.5	7454376	transcription factor bHLH110
mtr-u.5	25490216	transcription factor bHLH110

functional annotation

KEGG

GO BP

GO:0006357 [list] [network] regulation of transcription by RNA polymerase II

(1094 genes)

IEA

GO CC

GO:0005634 [list] [network] nucleus

(8281 genes)

IEA

GO MF

GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding	(462 genes)	IEA
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific	(643 genes)	IEA
GO:0046983 [list] [network] protein dimerization activity	(2051 genes)	IEA

Protein

XP_044352895.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10

(predict for XP_044352895.1)

Subcellular
localization
TargetP

other 5, chlo 5

(predict for XP_044352895.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 103649916	ath-u.5 for AT1G27660	gma-u.5 for 100782565	sly-u.5 for 101267521	vvi-u.5 for 100260944	ppo-u.5 for 7479726	ppo-u.5 for 7454376	mtr-u.5 for 25490216

Ortholog ID: 6145

Species

bdi

zma

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

transcription factor bHLH110

basic helix-loop-helix (bHLH) DNA-binding superfamily protein

transcription factor bHLH111

transcription factor bHLH110

transcription factor bHLH110-like

transcription factor bHLH110

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00564	Glycerophospholipid metabolism	2
zma00240	Pyrimidine metabolism	2
zma01232	Nucleotide metabolism	2
zma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00940	Phenylpropanoid biosynthesis	2
ghi03410	Base excision repair	2
ghi04016	MAPK signaling pathway - plant	2
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00760	Nicotinate and nicotinamide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00010	Glycolysis / Gluconeogenesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03060	Protein export	2

Expression

Expression pattern

Entrez Gene ID^*

100823554

103649916

839658

100782565

101267521

103835382

100260944

7454376

25490216

107943430

107936552

106389580

106367912

102601100

102623049

107783563

107790733

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 103649916 (zma-u.5 coexpression data)

Top 50 enrichment test to 103649916 (zma-u.5 coexpression data)


Species	zma	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	osa	sot	nta	cre	tae
Paralog	1	1	1	1	1	2	1	0	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 103649916 (zma-u.5 coexpression data)

Top 50 enrichment test to 103649916 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**