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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123077529   protein LOW PSII ACCUMULATION 1, chloroplastic 
 tae-r.2   123060457   protein LOW PSII ACCUMULATION 1, chloroplastic 
 tae-r.2   123068999   protein LOW PSII ACCUMULATION 1, chloroplastic 
 hvu-r.1   123442977   protein LOW PSII ACCUMULATION 1, chloroplastic 
 bdi-r.1   100821693   protein LOW PSII ACCUMULATION 1, chloroplastic 
 osa-u.5   4326021   protein LOW PSII ACCUMULATION 1, chloroplastic 
 zma-u.5   100275611   uncharacterized LOC100275611 
 sbi-r.1   110434116   protein LOW PSII ACCUMULATION 1, chloroplastic 
 ath-u.5   LPA1   tetratricopeptide repeat (TPR)-containing protein 
 gma-u.5   100793204   protein LOW PSII ACCUMULATION 1, chloroplastic 
 gma-u.5   100784188   protein LOW PSII ACCUMULATION 1, chloroplastic 
 sly-u.5   101252117   protein LOW PSII ACCUMULATION 1, chloroplastic 
 bra-r.6   103836638   protein LOW PSII ACCUMULATION 1, chloroplastic 
 vvi-u.5   100245310   protein LOW PSII ACCUMULATION 1, chloroplastic 
 ppo-u.5   7487775   protein LOW PSII ACCUMULATION 1, chloroplastic 
 mtr-u.5   11435276   protein LOW PSII ACCUMULATION 1, chloroplastic 
 ghi-r.1   107924175   protein LOW PSII ACCUMULATION 1, chloroplastic 
 ghi-r.1   121223746   protein LOW PSII ACCUMULATION 1, chloroplastic 
 bna-r.1   106401041   protein LOW PSII ACCUMULATION 1, chloroplastic 
 bna-r.1   106401713   protein LOW PSII ACCUMULATION 1, chloroplastic 
 sot-r.1   102599536   protein LOW PSII ACCUMULATION 1, chloroplastic 
 cit-r.1   102616689   protein LOW PSII ACCUMULATION 1, chloroplastic 
 nta-r.1   107815203   protein LOW PSII ACCUMULATION 1, chloroplastic 
 nta-r.1   107779630   protein LOW PSII ACCUMULATION 1, chloroplastic-like 
 cre-r.1   CHLRE_10g430150v5   uncharacterized protein 

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Top 50 coexpressed genes to 123077529 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123077529 (tae-r.2 coexpression data)

CoexMap"123077529"


taeLOC123077529 | Entrez gene ID : 123077529    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 1 1 1 1 2 1 1 1 1 1 2 2 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010270 [list] [network] photosystem II oxygen evolving complex assembly  (3 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (1890 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044355743.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  plas 1  (predict for XP_044355743.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_044355743.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123077529
tae-r.2
for
123060457
tae-r.2
for
123068999
hvu-r.1
for
123442977
bdi-r.1
for
100821693
osa-u.5
for
4326021
zma-u.5
for
100275611
sbi-r.1
for
110434116
ath-u.5
for
LPA1
gma-u.5
for
100793204
gma-u.5
for
100784188
sly-u.5
for
101252117
bra-r.6
for
103836638
vvi-u.5
for
100245310
ppo-u.5
for
7487775
mtr-u.5
for
11435276
ghi-r.1
for
107924175
ghi-r.1
for
121223746
bna-r.1
for
106401041
bna-r.1
for
106401713
sot-r.1
for
102599536
cit-r.1
for
102616689
nta-r.1
for
107815203
nta-r.1
for
107779630
cre-r.1
for
CHLRE_10g430150v5


Ortholog ID: 10482
Species tae tae tae hvu bdi osa zma sbi ath gma gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC123077529 LOC123060457 LOC123068999 LOC123442977 LOC100821693 LOC4326021 LOC100275611 LOC110434116 LPA1 LOC100793204 LOC100784188 LOC101252117 LOC103836638 LOC100245310 LOC7487775 LOC11435276 LOC107924175 LOC121223746 LOC106401041 LOC106401713 LOC102599536 LOC102616689 LOC107815203 LOC107779630 CHLRE_10g430150v5
Function* protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic uncharacterized LOC100275611 protein LOW PSII ACCUMULATION 1, chloroplastic tetratricopeptide repeat (TPR)-containing protein protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae00970 Aminoacyl-tRNA biosynthesis 2
tae00270 Cysteine and methionine metabolism 2
tae01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 8
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 10
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03460 Fanconi anemia pathway 2
bna00750 Vitamin B6 metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01240 Biosynthesis of cofactors 4
bna00750 Vitamin B6 metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 7
sot03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta00564 Glycerophospholipid metabolism 2
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 5
nta03010 Ribosome 4
nta00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123077529 123060457 123068999 123442977 100821693 4326021 100275611 110434116 839350 100793204 100784188 101252117 103836638 100245310 7487775 11435276 107924175 121223746 106401041 106401713 102599536 102616689 107815203 107779630 5728099
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