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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123078102   cyclic dof factor 2 
 tae-r.2   123061111   cyclic dof factor 3 
 tae-r.2   123069617   cyclic dof factor 2 
 tae-r.2   123061029   cyclic dof factor 2 
 hvu-r.1   123424683   cyclic dof factor 1-like 
 hvu-r.1   123443453   cyclic dof factor 2 
 hvu-r.1   123443531   cyclic dof factor 3-like 
 bdi-r.1   100841048   cyclic dof factor 1 
 bdi-r.1   100837366   cyclic dof factor 2 
 bdi-r.1   100825862   cyclic dof factor 1 
 osa-u.5   4324267   cyclic dof factor 1 
 osa-u.5   4331765   cyclic dof factor 1 
 osa-u.5   4344326   cyclic dof factor 2 
 zma-u.5   100193013   uncharacterized LOC100193013 
 zma-u.5   103650023   cyclic dof factor 2 
 zma-u.5   100275567   uncharacterized LOC100275567 
 sbi-r.1   8082122   cyclic dof factor 1 
 sbi-r.1   8078579   cyclic dof factor 2 
 sbi-r.1   8054666   cyclic dof factor 2 
 ath-u.5   CDF3   cycling DOF factor 3 
 ath-u.5   CDF2   cycling DOF factor 2 
 ath-u.5   CDF1   cycling DOF factor 1 
 gma-u.5   778113   cyclic dof factor 3 
 gma-u.5   100817354   cyclic dof factor 3 
 gma-u.5   100813787   zf-Dof domain-containing protein 
 sly-u.5   101262001   cyclic dof factor 1 
 sly-u.5   Dof22   Dof zinc finger protein 22 
 sly-u.5   101248009   cyclic dof factor 1 
 bra-r.6   103855006   cyclic dof factor 1 
 bra-r.6   103850147   cyclic dof factor 2 
 bra-r.6   103863905   cyclic dof factor 2 
 vvi-u.5   100254372   cyclic dof factor 2 
 vvi-u.5   100241530   cyclic dof factor 3 
 vvi-u.5   100265355   cyclic dof factor 2 
 ppo-u.5   7463038   cyclic dof factor 3 
 ppo-u.5   7489704   cyclic dof factor 3 
 ppo-u.5   7495982   cyclic dof factor 2 
 mtr-u.5   11445690   cyclic dof factor 1 
 mtr-u.5   25490407   cyclic dof factor 1 
 mtr-u.5   11435622   cyclic dof factor 1 
 ghi-r.1   107890451   cyclic dof factor 1 
 ghi-r.1   121204727   cyclic dof factor 2 
 ghi-r.1   107946520   cyclic dof factor 3 
 bna-r.1   111207855   cyclic dof factor 1-like 
 bna-r.1   106435356   cyclic dof factor 3 
 bna-r.1   106352672   cyclic dof factor 2 
 sot-r.1   102597615   cyclic dof factor 1-like 
 sot-r.1   102603307   cyclic dof factor 1 
 sot-r.1   102600000   cyclic dof factor 3-like 
 cit-r.1   102615735   cyclic dof factor 2 
 cit-r.1   102612184   cyclic dof factor 3-like 
 cit-r.1   102629672   cyclic dof factor 3 
 nta-r.1   107832809   cyclic dof factor 1 
 nta-r.1   107830415   cyclic dof factor 1 
 nta-r.1   107823205   cyclic dof factor 1 

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Top 50 coexpressed genes to 123078102 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123078102 (tae-r.2 coexpression data)

CoexMap"123078102"


taeLOC123078102 | Entrez gene ID : 123078102    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (5253 genes)  IEA  
GO CC
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3484 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (6662 genes)  IEA  
Protein XP_044356436.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_044356436.1)
Subcellular
localization
TargetP
other 6  (predict for XP_044356436.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123078102
tae-r.2
for
123061111
tae-r.2
for
123069617
tae-r.2
for
123061029
hvu-r.1
for
123424683
hvu-r.1
for
123443453
hvu-r.1
for
123443531
bdi-r.1
for
100841048
bdi-r.1
for
100837366
bdi-r.1
for
100825862
osa-u.5
for
4324267
osa-u.5
for
4331765
osa-u.5
for
4344326
zma-u.5
for
100193013
zma-u.5
for
103650023
zma-u.5
for
100275567
sbi-r.1
for
8082122
sbi-r.1
for
8078579
sbi-r.1
for
8054666
ath-u.5
for
CDF3
ath-u.5
for
CDF2
ath-u.5
for
CDF1
gma-u.5
for
778113
gma-u.5
for
100817354
gma-u.5
for
100813787
sly-u.5
for
101262001
sly-u.5
for
Dof22
sly-u.5
for
101248009
bra-r.6
for
103855006
bra-r.6
for
103850147
bra-r.6
for
103863905
vvi-u.5
for
100254372
vvi-u.5
for
100241530
vvi-u.5
for
100265355
ppo-u.5
for
7463038
ppo-u.5
for
7489704
ppo-u.5
for
7495982
mtr-u.5
for
11445690
mtr-u.5
for
25490407
mtr-u.5
for
11435622
ghi-r.1
for
107890451
ghi-r.1
for
121204727
ghi-r.1
for
107946520
bna-r.1
for
111207855
bna-r.1
for
106435356
bna-r.1
for
106352672
sot-r.1
for
102597615
sot-r.1
for
102603307
sot-r.1
for
102600000
cit-r.1
for
102615735
cit-r.1
for
102612184
cit-r.1
for
102629672
nta-r.1
for
107832809
nta-r.1
for
107830415
nta-r.1
for
107823205


Ortholog ID: 658
Species tae tae tae hvu hvu hvu bdi bdi bdi osa osa osa zma zma zma sbi sbi sbi ath ath ath gma gma gma sly sly sly bra bra bra vvi vvi vvi ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna sot sot sot cit cit cit nta nta nta
Symbol LOC123061029 LOC123051520 LOC123078183 LOC123424683 LOC123443531 LOC123449559 LOC100841048 LOC100825862 LOC100824853 LOC4324267 LOC4331765 LOC4344326 LOC100275567 LOC100275712 LOC100276261 LOC8082122 LOC8054666 LOC8085828 CDF3 CDF2 CDF1 LOC100813315 LOC100788246 LOC100788247 LOC101248009 LOC101243956 LOC101252243 LOC103855006 LOC103863905 LOC103874677 LOC100241530 LOC100265355 LOC100257057 LOC7463038 LOC7495982 LOC11435622 LOC11410541 LOC11409779 LOC107890451 LOC107946520 LOC107924499 LOC106435356 LOC106352672 LOC106432304 LOC102603307 LOC102600000 LOC102582118 LOC102615735 LOC102612184 LOC102629672 LOC107823205 LOC107804993 LOC107802463
Function* cyclic dof factor 2 cyclic dof factor 1 cyclic dof factor 3 cyclic dof factor 1-like cyclic dof factor 3-like cyclic dof factor 1-like cyclic dof factor 1 cyclic dof factor 1 cyclic dof factor 1 cyclic dof factor 1 cyclic dof factor 1 cyclic dof factor 2 uncharacterized LOC100275567 cyclic dof factor 2 uncharacterized LOC100276261 cyclic dof factor 1 cyclic dof factor 2 cyclic dof factor 2 cycling DOF factor 3 cycling DOF factor 2 cycling DOF factor 1 cyclic dof factor 2 cyclic dof factor 1 cyclic dof factor 2 cyclic dof factor 1 cyclic dof factor 1 cyclic dof factor 1-like cyclic dof factor 1 cyclic dof factor 2 cyclic dof factor 1 cyclic dof factor 3 cyclic dof factor 2 cyclic dof factor 3 cyclic dof factor 3 cyclic dof factor 2 cyclic dof factor 1 cyclic dof factor 2 cyclic dof factor 1 cyclic dof factor 1 cyclic dof factor 3 cyclic dof factor 3 cyclic dof factor 3 cyclic dof factor 2 cyclic dof factor 2 cyclic dof factor 1 cyclic dof factor 3-like cyclic dof factor 2-like cyclic dof factor 2 cyclic dof factor 3-like cyclic dof factor 3 cyclic dof factor 1 cyclic dof factor 1-like cyclic dof factor 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00460 Cyanoamino acid metabolism 3
tae00500 Starch and sucrose metabolism 3
tae00999 Biosynthesis of various plant secondary metabolites 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00270 Cysteine and methionine metabolism 2
hvu00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00561 Glycerolipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00561 Glycerolipid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00010 Glycolysis / Gluconeogenesis 2
zma00030 Pentose phosphate pathway 2
zma00051 Fructose and mannose metabolism 2
zma00052 Galactose metabolism 2
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00270 Cysteine and methionine metabolism 3
mtr00330 Arginine and proline metabolism 3
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 3
bna04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 2
nta00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123061029 123051520 123078183 123424683 123443531 123449559 100841048 100825862 100824853 4324267 4331765 4344326 100275567 100275712 100276261 8082122 8054666 8085828 823904 833962 836364 100813315 100788246 100788247 101248009 101243956 101252243 103855006 103863905 103874677 100241530 100265355 100257057 7463038 7495982 11435622 11410541 11409779 107890451 107946520 107924499 106435356 106352672 106432304 102603307 102600000 102582118 102615735 102612184 102629672 107823205 107804993 107802463
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