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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123051061   MADS-box transcription factor 56 
 tae-r.2   123063125   MADS-box transcription factor 51 
 hvu-r.1   123445264   MADS-box transcription factor 51-like 
 hvu-r.1   123403908   MADS-box protein SOC1-like 
 bdi-r.1   100841167   MADS-box transcription factor 50-like 
 bdi-r.1   100823405   MADS-box transcription factor 51-like 
 bdi-r.1   100823796   MADS-box transcription factor 56-like 
 osa-u.5   4331445   MADS-box transcription factor 50-like 
 osa-u.5   4327247   MADS-box transcription factor 51-like 
 osa-u.5   107276241   MADS-box transcription factor 50-like 
 zma-u.5   100382583   uncharacterized LOC100382583 
 zma-u.5   542042   MADS1 
 zma-u.5   100279630   uncharacterized LOC100279630 
 sbi-r.1   8060808   MADS-box transcription factor 51 
 sbi-r.1   110431745   MADS-box transcription factor 56-like 
 sbi-r.1   8079807   MADS-box transcription factor 51 
 ath-u.5   AGL42   AGAMOUS-like 42 
 gma-u.5   100805260   agamous-like MADS-box protein AGL19-like 
 gma-u.5   100816440   MADS-box protein SOC1 
 sly-u.5   FYFL   MADS-box protein SOC1-like 
 sly-u.5   101259089   MADS-box protein SOC1-like 
 sly-u.5   101250432   agamous-like MADS-box protein AGL19 
 bra-r.6   103839919   agamous-like MADS-box protein AGL14 
 bra-r.6   103874654   MADS-box protein AGL42-like 
 bra-r.6   103861349   agamous-like MADS-box protein AGL19 
 vvi-u.5   100268115   MADS-box protein AGL42 
 vvi-u.5   100252657   MADS-box transcription factor 15 
 vvi-u.5   100246102   agamous-like MADS-box protein AGL19 
 ppo-u.5   7494028   MADS-box protein SOC1 
 ppo-u.5   7488925   MADS-box protein SOC1 
 mtr-u.5   11432102   MADS-box protein SOC1 
 mtr-u.5   25493640   agamous-like MADS-box protein AGL19 
 mtr-u.5   25500990   MADS-box protein SOC1 
 ghi-r.1   107890633   MADS-box protein SOC1 
 ghi-r.1   107908954   MADS-box protein SOC1 
 ghi-r.1   107911933   MADS-box protein SOC1 
 bna-r.1   106405909   agamous-like MADS-box protein AGL19 
 sot-r.1   102592177   MADS-box protein SOC1-like 
 sot-r.1   102599642   agamous-like MADS-box protein AGL19 
 sot-r.1   102601314   MADS-box protein SOC1-like 
 cit-r.1   102577939   SOC1-like protein 1 
 cit-r.1   127901497   MADS-box protein SOC1 
 cit-r.1   102577938   SOC1-like protein 2 
 nta-r.1   107793038   MADS-box protein AGL42 
 nta-r.1   107828738   MADS-box protein SOC1 
 nta-r.1   107761745   agamous-like MADS-box protein AGL19 
 cre-r.1   CHLRE_11g467577v5   uncharacterized protein 

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Top 50 coexpressed genes to 123051061 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123051061 (tae-r.2 coexpression data)

CoexMap"123090346"


taeLOC123090346 | Entrez gene ID : 123090346    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 2 2 3 3 3 3 1 2 3 3 3 2 3 3 1 3 3 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (367 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (8281 genes)  IEA  
GO MF
GO:0000977 [list] [network] RNA polymerase II transcription regulatory region sequence-specific DNA binding  (700 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (2051 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3484 genes)  IEA  
Protein XP_044367623.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  pero 2,  cysk_nucl 2,  chlo 1,  cyto 1,  plas 1,  E.R. 1,  golg 1,  golg_plas 1,  E.R._plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_044367623.1)
Subcellular
localization
TargetP
other 6,  mito 4  (predict for XP_044367623.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123051061
tae-r.2
for
123063125
hvu-r.1
for
123445264
hvu-r.1
for
123403908
bdi-r.1
for
100841167
bdi-r.1
for
100823405
bdi-r.1
for
100823796
osa-u.5
for
4331445
osa-u.5
for
4327247
osa-u.5
for
107276241
zma-u.5
for
100382583
zma-u.5
for
542042
zma-u.5
for
100279630
sbi-r.1
for
8060808
sbi-r.1
for
110431745
sbi-r.1
for
8079807
ath-u.5
for
AGL42
gma-u.5
for
100805260
gma-u.5
for
100816440
sly-u.5
for
FYFL
sly-u.5
for
101259089
sly-u.5
for
101250432
bra-r.6
for
103839919
bra-r.6
for
103874654
bra-r.6
for
103861349
vvi-u.5
for
100268115
vvi-u.5
for
100252657
vvi-u.5
for
100246102
ppo-u.5
for
7494028
ppo-u.5
for
7488925
mtr-u.5
for
11432102
mtr-u.5
for
25493640
mtr-u.5
for
25500990
ghi-r.1
for
107890633
ghi-r.1
for
107908954
ghi-r.1
for
107911933
bna-r.1
for
106405909
sot-r.1
for
102592177
sot-r.1
for
102599642
sot-r.1
for
102601314
cit-r.1
for
102577939
cit-r.1
for
127901497
cit-r.1
for
102577938
nta-r.1
for
107793038
nta-r.1
for
107828738
nta-r.1
for
107761745
cre-r.1
for
CHLRE_11g467577v5


Ortholog ID: 245
Species tae tae tae hvu hvu bdi bdi bdi osa osa osa zma zma zma sbi sbi sbi ath gma gma gma sly sly sly bra vvi vvi vvi ppo ppo ppo mtr ghi ghi ghi bna bna sot sot sot cit cit cit nta nta nta cre
Symbol LOC123051047 LOC100125729 LOC123093767 LOC123445264 LOC123445266 LOC100824579 LOC100825614 LOC100826117 LOC4327247 LOC107276190 LOC4349237 LOC100279630 LOC103649797 LOC541985 LOC8060808 LOC110431745 LOC8077968 AGL14 LOC100816440 LOC100807963 LOC100784678 FYFL LOC101244491 LOC544075 SOC1 LOC100268115 LOC100246102 MADS8 LOC7494028 LOC18094432 LOC7482155 LOC25500990 LOC107908954 LOC107963688 LOC107957281 LOC106389254 LOC106440467 LOC102601314 LOC102603784 LOC107058273 LOC102577939 LOC102577938 LOC102619676 LOC107828738 LOC107776514 LOC107816198 CHLRE_11g467577v5
Function* MADS-box transcription factor 56 MADS-box transcription factor 50 MADS-box transcription factor 50 MADS-box transcription factor 51-like MADS-box transcription factor 51-like agamous-like MADS-box protein AGL14-like MADS-box protein SOC1 MADS-box transcription factor 51 MADS-box transcription factor 51-like MADS-box protein SOC1 MADS-box transcription factor 56-like uncharacterized LOC100279630 MADS-box transcription factor 51 MADS14 MADS-box transcription factor 51 MADS-box transcription factor 56-like MADS-box transcription factor 50 AGAMOUS-like 14 MADS-box protein SOC1 MADS-box protein SOC1 MADS-box protein SOC1 MADS-box protein SOC1-like MADS-box protein AGL42-like MADS-box protein SOC1 MADS-box protein SOC1-like MADS-box protein AGL42 agamous-like MADS-box protein AGL19 MADS-box protein MADS-box protein SOC1 agamous-like MADS-box protein AGL19 MADS-box protein AGL42 MADS-box protein SOC1 MADS-box protein SOC1 agamous-like MADS-box protein AGL19 MADS-box protein SOC1-like MADS-box protein AGL42 agamous-like MADS-box protein AGL19 MADS-box protein SOC1-like MADS-box protein SOC1-like MADS-box protein SOC1-like SOC1-like protein 1 SOC1-like protein 2 truncated transcription factor CAULIFLOWER A-like MADS-box protein SOC1 MADS-box protein SOC1 MADS-box protein SOC1-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00260 Glycine, serine and threonine metabolism 2
hvu00350 Tyrosine metabolism 2
hvu00360 Phenylalanine metabolism 2
hvu00410 beta-Alanine metabolism 2
hvu00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 4
osa04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
sbi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
sbi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04016 MAPK signaling pathway - plant 5
sbi04075 Plant hormone signal transduction 5
sbi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
sbi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00592 alpha-Linolenic acid metabolism 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 3
vvi04016 MAPK signaling pathway - plant 2
vvi00910 Nitrogen metabolism 2
vvi01310 Nitrogen cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 2
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00710 Carbon fixation by Calvin cycle 4
ghi01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 4
sot04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 3
nta00941 Flavonoid biosynthesis 3
nta00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 3
nta00230 Purine metabolism 2
nta00240 Pyrimidine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123051047 100125729 123093767 123445264 123445266 100824579 100825614 100826117 4327247 107276190 4349237 100279630 103649797 541985 8060808 110431745 8077968 826795 100816440 100807963 100784678 101266695 101244491 544075 103858179 100268115 100246102 100232995 7494028 18094432 7482155 25500990 107908954 107963688 107957281 106389254 106440467 102601314 102603784 107058273 102577939 102577938 102619676 107828738 107776514 107816198 5726939
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