ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
tae-r.2	123091244	probable sucrose-phosphate synthase 5
tae-r.2	123063086	probable sucrose-phosphate synthase 1
tae-r.2	542872	probable sucrose-phosphate synthase 4
tae-r.2	543405	probable sucrose-phosphate synthase 3
hvu-r.1	123404029	probable sucrose-phosphate synthase 2
hvu-r.1	123447849	probable sucrose-phosphate synthase 5
bdi-r.1	100825323	probable sucrose-phosphate synthase 4
bdi-r.1	100828234	probable sucrose-phosphate synthase 5
bdi-r.1	100828661	probable sucrose-phosphate synthase 5
osa-u.5	107281310	probable sucrose-phosphate synthase 5
osa-u.5	4350151	probable sucrose-phosphate synthase 5
osa-u.5	4341642	probable sucrose-phosphate synthase 3
zma-u.5	100384650	uncharacterized LOC100384650
zma-u.5	100384028	uncharacterized LOC100384028
zma-u.5	100501516	probable sucrose-phosphate synthase 5
sbi-r.1	8079417	probable sucrose-phosphate synthase 2
sbi-r.1	8067709	probable sucrose-phosphate synthase 3
sbi-r.1	8071544	probable sucrose-phosphate synthase 5
ath-u.5	SPS1F	sucrose phosphate synthase 1F
ath-u.5	SPS3F	sucrose phosphate synthase 3F
ath-u.5	SPS2F	sucrose phosphate synthase 2F
gma-u.5	100807527	probable sucrose-phosphate synthase 3
gma-u.5	100806543	probable sucrose-phosphate synthase 3
gma-u.5	100798787	probable sucrose-phosphate synthase
sly-u.5	sps	sucrose-phosphate synthase
sly-u.5	101055573	sucrose-phosphate synthase B
sly-u.5	101055611	sucrose-phosphate synthase A2
bra-r.6	103845691	sucrose-phosphate synthase 1
bra-r.6	103851339	sucrose-phosphate synthase 1
bra-r.6	103855902	probable sucrose-phosphate synthase 2
vvi-u.5	100241955	probable sucrose-phosphate synthase 1
vvi-u.5	100244135	probable sucrose-phosphate synthase 1
vvi-u.5	100262385	probable sucrose-phosphate synthase 3
ppo-u.5	7477753	sucrose-phosphate synthase 4
ppo-u.5	7458381	probable sucrose-phosphate synthase 1
ppo-u.5	7461652	probable sucrose-phosphate synthase 3
mtr-u.5	11405889	probable sucrose-phosphate synthase 2
mtr-u.5	11446673	probable sucrose-phosphate synthase
mtr-u.5	11436613	probable sucrose-phosphate synthase 2
ghi-r.1	107914804	probable sucrose-phosphate synthase 3
ghi-r.1	107897149	probable sucrose-phosphate synthase 3
ghi-r.1	107914058	probable sucrose-phosphate synthase 4
bna-r.1	111210345	sucrose-phosphate synthase 1-like
bna-r.1	106366768	probable sucrose-phosphate synthase 2
bna-r.1	106348525	probable sucrose-phosphate synthase 2
sot-r.1	102604080	probable sucrose-phosphate synthase 4
sot-r.1	102581151	probable sucrose-phosphate synthase 2
cit-r.1	102614911	probable sucrose-phosphate synthase 3
cit-r.1	102618138	probable sucrose-phosphate synthase 1
cit-r.1	102624502	sucrose-phosphate synthase 4
nta-r.1	107761563	putative sucrose-phosphate synthase
nta-r.1	107766133	probable sucrose-phosphate synthase
nta-r.1	107780355	putative sucrose-phosphate synthase 2
cre-r.1	CHLRE_12g524000v5	uncharacterized protein

Top 50 coexpressed genes to 123091244 (tae-r.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123091244 (tae-r.2 coexpression data)

CoexMap"123091244"

[Cytoscape]

Annotation

functional annotation

KEGG

taes00500 [list] [network] Starch and sucrose metabolism (558 genes)

GO BP

GO:0005985 [list] [network] sucrose metabolic process

(86 genes)

IEA

GO CC

GO MF

GO:0046524 [list] [network] sucrose-phosphate synthase activity

(15 genes)

IEA

Protein

XP_044368623.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, nucl 2, plas 1, chlo 1, pero 1, golg_plas 1, E.R._vacu 1, cysk_plas 1, mito_plas 1

(predict for XP_044368623.1)

Subcellular
localization
TargetP

other 5

(predict for XP_044368623.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123091244	tae-r.2 for 123063086	tae-r.2 for 542872	tae-r.2 for 543405	hvu-r.1 for 123404029	hvu-r.1 for 123447849	bdi-r.1 for 100825323	bdi-r.1 for 100828234	bdi-r.1 for 100828661	osa-u.5 for 107281310	osa-u.5 for 4350151	osa-u.5 for 4341642	zma-u.5 for 100384650	zma-u.5 for 100384028	zma-u.5 for 100501516	sbi-r.1 for 8079417	sbi-r.1 for 8067709	sbi-r.1 for 8071544	ath-u.5 for SPS1F	ath-u.5 for SPS3F	ath-u.5 for SPS2F	gma-u.5 for 100807527	gma-u.5 for 100806543	gma-u.5 for 100798787	sly-u.5 for sps	sly-u.5 for 101055573	sly-u.5 for 101055611	bra-r.6 for 103845691	bra-r.6 for 103851339	bra-r.6 for 103855902	vvi-u.5 for 100241955	vvi-u.5 for 100244135	vvi-u.5 for 100262385	ppo-u.5 for 7477753	ppo-u.5 for 7458381	ppo-u.5 for 7461652	mtr-u.5 for 11405889	mtr-u.5 for 11446673	mtr-u.5 for 11436613	ghi-r.1 for 107914804	ghi-r.1 for 107897149	ghi-r.1 for 107914058	bna-r.1 for 111210345	bna-r.1 for 106366768	bna-r.1 for 106348525	sot-r.1 for 102604080	sot-r.1 for 102581151	cit-r.1 for 102614911	cit-r.1 for 102618138	cit-r.1 for 102624502	nta-r.1 for 107761563	nta-r.1 for 107766133	nta-r.1 for 107780355	cre-r.1 for CHLRE_12g524000v5

Ortholog

Ortholog ID: 681

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

SPS1F

SPS3F

SPS2F

sps

Function^*

probable sucrose-phosphate synthase 5

probable sucrose-phosphate synthase 2

probable sucrose-phosphate synthase 4

probable sucrose-phosphate synthase 5

probable sucrose-phosphate synthase 4

probable sucrose-phosphate synthase 3

probable sucrose-phosphate synthase 5

probable sucrose-phosphate synthase 3

sucrose-phosphate synthase

probable sucrose-phosphate synthase 2

probable sucrose-phosphate synthase 4

probable sucrose-phosphate synthase 1

uncharacterized LOC100384028

probable sucrose-phosphate synthase 5

sucrose-phosphate synthase-like

probable sucrose-phosphate synthase 2

probable sucrose-phosphate synthase 5

probable sucrose-phosphate synthase 4

sucrose phosphate synthase 1F

sucrose phosphate synthase 3F

sucrose phosphate synthase 2F

probable sucrose-phosphate synthase 3

probable sucrose-phosphate synthase

probable sucrose-phosphate synthase 4

sucrose-phosphate synthase

sucrose-phosphate synthase B

sucrose-phosphate synthase A2

sucrose-phosphate synthase 1

probable sucrose-phosphate synthase 2

probable sucrose-phosphate synthase 4

probable sucrose-phosphate synthase 1

sucrose-phosphate synthase 1

probable sucrose-phosphate synthase 1

probable sucrose-phosphate synthase 3

probable sucrose-phosphate synthase 1

probable sucrose-phosphate synthase 2

probable sucrose-phosphate synthase

probable sucrose-phosphate synthase 2

probable sucrose-phosphate synthase 4

probable sucrose-phosphate synthase 1

probable sucrose-phosphate synthase 2

sucrose-phosphate synthase 1

probable sucrose-phosphate synthase 3

probable sucrose-phosphate synthase 4

probable sucrose-phosphate synthase 2

probable sucrose-phosphate synthase 3

probable sucrose-phosphate synthase 1

putative sucrose-phosphate synthase 2

sucrose-phosphate synthase 4

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae01200	Carbon metabolism	7
tae00010	Glycolysis / Gluconeogenesis	6
tae00620	Pyruvate metabolism	4
tae00630	Glyoxylate and dicarboxylate metabolism	4
tae00710	Carbon fixation by Calvin cycle	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00500	Starch and sucrose metabolism	3
tae04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00500	Starch and sucrose metabolism	2
tae00770	Pantothenate and CoA biosynthesis	2
tae01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01200	Carbon metabolism	5
bdi01230	Biosynthesis of amino acids	3
bdi00906	Carotenoid biosynthesis	2
bdi00010	Glycolysis / Gluconeogenesis	2
bdi00030	Pentose phosphate pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00630	Glyoxylate and dicarboxylate metabolism	3
bdi01200	Carbon metabolism	3
bdi04146	Peroxisome	3
bdi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04142	Lysosome	2
osa04141	Protein processing in endoplasmic reticulum	2
osa04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04120	Ubiquitin mediated proteolysis	2
osa00071	Fatty acid degradation	2
osa01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03083	Polycomb repressive complex	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00500	Starch and sucrose metabolism	8
zma00052	Galactose metabolism	5
zma00520	Amino sugar and nucleotide sugar metabolism	5
zma01250	Biosynthesis of nucleotide sugars	5
zma00010	Glycolysis / Gluconeogenesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	3
sbi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00940	Phenylpropanoid biosynthesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00500	Starch and sucrose metabolism	9
ath00630	Glyoxylate and dicarboxylate metabolism	3
ath01200	Carbon metabolism	3
ath01210	2-Oxocarboxylic acid metabolism	3
ath01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00380	Tryptophan metabolism	2
ath00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00500	Starch and sucrose metabolism	3
gma00010	Glycolysis / Gluconeogenesis	2
gma00040	Pentose and glucuronate interconversions	2
gma00053	Ascorbate and aldarate metabolism	2
gma00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00564	Glycerophospholipid metabolism	2
gma00740	Riboflavin metabolism	2
gma04142	Lysosome	2
gma00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00500	Starch and sucrose metabolism	7
sly00010	Glycolysis / Gluconeogenesis	2
sly00030	Pentose phosphate pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00500	Starch and sucrose metabolism	5
bra00010	Glycolysis / Gluconeogenesis	3
bra00030	Pentose phosphate pathway	3
bra00052	Galactose metabolism	3
bra00520	Amino sugar and nucleotide sugar metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04016	MAPK signaling pathway - plant	2
bra04075	Plant hormone signal transduction	2
bra04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00630	Glyoxylate and dicarboxylate metabolism	5
bra01200	Carbon metabolism	5
bra00260	Glycine, serine and threonine metabolism	4
bra04146	Peroxisome	3
bra00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00250	Alanine, aspartate and glutamate metabolism	3
mtr00460	Cyanoamino acid metabolism	2
mtr00270	Cysteine and methionine metabolism	2
mtr01200	Carbon metabolism	2
mtr01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00500	Starch and sucrose metabolism	4
mtr00520	Amino sugar and nucleotide sugar metabolism	2
mtr01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00906	Carotenoid biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	2
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	7
ghi00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	5
ghi04075	Plant hormone signal transduction	4
ghi00562	Inositol phosphate metabolism	2
ghi00564	Glycerophospholipid metabolism	2
ghi00565	Ether lipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00052	Galactose metabolism	3
bna00561	Glycerolipid metabolism	3
bna00600	Sphingolipid metabolism	3
bna00603	Glycosphingolipid biosynthesis - globo and isoglobo series	3
bna00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00562	Inositol phosphate metabolism	4
bna04070	Phosphatidylinositol signaling system	4
bna00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna02010	ABC transporters	6
bna04016	MAPK signaling pathway - plant	4
bna04626	Plant-pathogen interaction	4
bna00940	Phenylpropanoid biosynthesis	3
bna00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01200	Carbon metabolism	3
sot00010	Glycolysis / Gluconeogenesis	2
sot00030	Pentose phosphate pathway	2
sot00051	Fructose and mannose metabolism	2
sot00710	Carbon fixation by Calvin cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	10
cit03040	Spliceosome	2
cit04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre01240	Biosynthesis of cofactors	2

Expression

Expression pattern

Entrez Gene ID^*

123091244

123136523

123172359

123447849

123415190

123413108

100828234

100831622

100844859

4328527

4345220

4324364

100384028

100501516

103650849

8079417

8071544

8074599

832150

839382

830979

100807527

100798787

100786531

543516

101055573

101055611

103845691

103855902

103853568

100241955

100244135

100232974

7458381

7461652

18111090

11405889

11446673

11436613

107959558

121218323

121225232

106366768

106439492

106397279

102604080

102581151

102614911

102618138

102630462

107780355

107789345

5722527

The preparation time of this page was 0.3 [sec].


Species	tae	hvu	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	2	3	3	3	3	3	3	3	3	3	3	3	3	3	2	3	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123091244 (tae-r.2 coexpression data)

Top 50 enrichment test to 123091244 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**