Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   9268630   pentatricopeptide repeat-containing protein At2g20540 
 osa-u.5   4351099   pentatricopeptide repeat-containing protein At1g09190 
 zma-u.5   100280409   uncharacterized LOC100280409 
 ath-u.5   AT1G09190   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100805000   pentatricopeptide repeat-containing protein At1g09190 
 sly-u.5   101244713   pentatricopeptide repeat-containing protein 
 sly-u.5   101247663   pentatricopeptide repeat-containing protein At2g20540 
 vvi-u.5   100251129   pentatricopeptide repeat-containing protein At5g66520 
 mtr-u.5   11432005   pentatricopeptide repeat-containing protein At2g20540 
 mtr-u.5   11407190   pentatricopeptide repeat-containing protein At1g09190 

close


Top 50 coexpressed genes to 9268630 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 9268630 (osa-u.5 coexpression data)

CoexMap"123093276"


taeLOC123093276 | Entrez gene ID : 123093276    
Species osa zma ath gma sly vvi mtr hvu bna cit bra ghi ppo sbi bdi nta tae cre sot
Paralog 2 1 1 1 2 1 2 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (1066 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (4004 genes)  IEA  
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044371133.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 2,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for XP_044371133.1)
Subcellular
localization
TargetP
other 4  (predict for XP_044371133.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
9268630
osa-u.5
for
4351099
zma-u.5
for
100280409
ath-u.5
for
AT1G09190
gma-u.5
for
100805000
sly-u.5
for
101244713
sly-u.5
for
101247663
vvi-u.5
for
100251129
mtr-u.5
for
11432005
mtr-u.5
for
11407190


Ortholog ID: 4040
Species hvu bdi osa osa zma sbi ath gma sly sly bra bra mtr mtr ghi ghi sot sot cit cit nta nta
Symbol LOC123446316 LOC104582647 LOC4351099 LOC9268630 LOC100280409 LOC8082854 AT1G09190 LOC100805000 LOC101244713 LOC101247663 LOC103842597 LOC103871648 LOC11432005 LOC11407190 LOC107927178 LOC107887002 LOC102602131 LOC102580133 LOC102621282 LOC102617057 LOC107783794 LOC107825572
Function* pentatricopeptide repeat-containing protein At1g09190-like pentatricopeptide repeat-containing protein At2g20540-like pentatricopeptide repeat-containing protein At1g09190 pentatricopeptide repeat-containing protein At2g20540 uncharacterized LOC100280409 pentatricopeptide repeat-containing protein At2g20540 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At1g09190 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At2g20540 pentatricopeptide repeat-containing protein At2g20540 pentatricopeptide repeat-containing protein At1g09190 pentatricopeptide repeat-containing protein At2g20540 pentatricopeptide repeat-containing protein At1g09190 pentatricopeptide repeat-containing protein At1g09190 pentatricopeptide repeat-containing protein At1g09190 pentatricopeptide repeat-containing protein At1g09190 pentatricopeptide repeat-containing protein At2g20540-like pentatricopeptide repeat-containing protein At2g20540 pentatricopeptide repeat-containing protein At1g09190 pentatricopeptide repeat-containing protein At1g09190-like pentatricopeptide repeat-containing protein At2g20540-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
sbi00280 Valine, leucine and isoleucine degradation 2
sbi00410 beta-Alanine metabolism 2
sbi00640 Propanoate metabolism 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03082 ATP-dependent chromatin remodeling 2
nta00906 Carotenoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123446316 104582647 4351099 9268630 100280409 8082854 837439 100805000 101244713 101247663 103842597 103871648 11432005 11407190 107927178 107887002 102602131 102580133 102621282 102617057 107783794 107825572
The preparation time of this page was 0.1 [sec].