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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123077360   pentatricopeptide repeat-containing protein At5g66520-like 
 hvu-r.1   123442860   pentatricopeptide repeat-containing protein At5g66520-like 
 hvu-r.1   123450365   pentatricopeptide repeat-containing protein At5g43790-like 
 osa-u.5   9267687   pentatricopeptide repeat-containing protein At1g08070, chloroplastic 
 zma-u.5   103636848   pentatricopeptide repeat-containing protein At5g66520 
 ath-u.5   AT5G43790   Pentatricopeptide repeat (PPR) superfamily protein 
 sly-u.5   101251308   pentatricopeptide repeat-containing protein At5g43790 
 bra-r.6   103827952   pentatricopeptide repeat-containing protein At5g43790 
 vvi-u.5   100264947   pentatricopeptide repeat-containing protein At5g43790 
 mtr-u.5   11440274   pentatricopeptide repeat-containing protein At5g43790 
 ghi-r.1   107928457   pentatricopeptide repeat-containing protein At5g43790 
 ghi-r.1   107929130   pentatricopeptide repeat-containing protein At5g43790 
 bna-r.1   125589569   pentatricopeptide repeat-containing protein At5g43790-like 
 sot-r.1   102604877   pentatricopeptide repeat-containing protein At5g43790 
 nta-r.1   107823102   pentatricopeptide repeat-containing protein At5g43790 
 nta-r.1   107760708   pentatricopeptide repeat-containing protein At5g43790-like 

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Top 50 coexpressed genes to 123077360 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123077360 (tae-r.2 coexpression data)

CoexMap"123096549"


taeLOC123096549 | Entrez gene ID : 123096549    
Species tae hvu osa zma ath sly bra vvi mtr ghi bna sot nta gma cre ppo sbi cit bdi
Paralog 1 2 1 1 1 1 1 1 1 2 1 1 2 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (1066 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (2838 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (4004 genes)  IEA  
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044374244.1 [sequence] [blastp]
XP_044374245.1 [sequence] [blastp]
XP_044374246.1 [sequence] [blastp]
XP_044374247.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 2,  nucl 1,  chlo_mito 1,  mito 1,  plas 1,  vacu 1,  cysk_nucl 1,  mito_plas 1  (predict for XP_044374244.1)
chlo 2,  nucl 1,  chlo_mito 1,  mito 1,  plas 1,  vacu 1,  cysk_nucl 1,  mito_plas 1  (predict for XP_044374245.1)
chlo 2,  nucl 1,  chlo_mito 1,  mito 1,  plas 1,  vacu 1,  cysk_nucl 1,  mito_plas 1  (predict for XP_044374246.1)
chlo 2,  nucl 1,  chlo_mito 1,  mito 1,  plas 1,  vacu 1,  cysk_nucl 1,  mito_plas 1  (predict for XP_044374247.1)
Subcellular
localization
TargetP
chlo 5,  other 5  (predict for XP_044374244.1)
chlo 5,  other 5  (predict for XP_044374245.1)
chlo 5,  other 5  (predict for XP_044374246.1)
chlo 5,  other 5  (predict for XP_044374247.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123077360
hvu-r.1
for
123442860
hvu-r.1
for
123450365
osa-u.5
for
9267687
zma-u.5
for
103636848
ath-u.5
for
AT5G43790
sly-u.5
for
101251308
bra-r.6
for
103827952
vvi-u.5
for
100264947
mtr-u.5
for
11440274
ghi-r.1
for
107928457
ghi-r.1
for
107929130
bna-r.1
for
125589569
sot-r.1
for
102604877
nta-r.1
for
107823102
nta-r.1
for
107760708


Ortholog ID: 9138
Species hvu hvu osa zma ath sly bra vvi mtr ghi ghi bna sot nta nta
Symbol LOC123442860 LOC123450365 LOC9267687 LOC103636848 AT5G43790 LOC101251308 LOC103827952 LOC100264947 LOC11440274 LOC107928457 LOC107929130 LOC125589569 LOC102604877 LOC107823102 LOC107760708
Function* pentatricopeptide repeat-containing protein At5g66520-like pentatricopeptide repeat-containing protein At5g43790-like pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At5g66520 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g43790 pentatricopeptide repeat-containing protein At5g43790 pentatricopeptide repeat-containing protein At5g43790 pentatricopeptide repeat-containing protein At5g43790 pentatricopeptide repeat-containing protein At5g43790 pentatricopeptide repeat-containing protein At5g43790 pentatricopeptide repeat-containing protein At5g43790-like pentatricopeptide repeat-containing protein At5g43790 pentatricopeptide repeat-containing protein At5g43790 pentatricopeptide repeat-containing protein At5g43790-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 2
bra03040 Spliceosome 2
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123442860 123450365 9267687 103636848 834401 101251308 103827952 100264947 11440274 107928457 107929130 125589569 102604877 107823102 107760708
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