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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123097643   30S ribosomal protein S1, chloroplastic 
 tae-r.2   123085699   30S ribosomal protein S1, chloroplastic 
 tae-r.2   123092307   30S ribosomal protein S1, chloroplastic 
 hvu-r.1   123448789   30S ribosomal protein S1, chloroplastic 
 bdi-r.1   100823611   30S ribosomal protein S1, chloroplastic 
 osa-u.5   4332652   small ribosomal subunit protein bS1c 
 zma-u.5   100283777   30S ribosomal protein S1,chloroplastic-like 
 sbi-r.1   8081054   30S ribosomal protein S1, chloroplastic 
 ath-u.5   RPS1   ribosomal protein S1 
 gma-u.5   100812847   30S ribosomal protein S1, chloroplastic-like 
 gma-u.5   100810511   30S ribosomal protein S1 
 gma-u.5   100806905   30S ribosomal protein S1 
 sly-u.5   101245144   30S ribosomal protein S1 
 sly-u.5   101247851   small ribosomal subunit protein bS1c 
 bra-r.6   103874603   30S ribosomal protein S1, chloroplastic 
 bra-r.6   103837311   30S ribosomal protein S1, chloroplastic 
 vvi-u.5   100265325   small ribosomal subunit protein bS1c 
 ppo-u.5   7485852   30S ribosomal protein S1, chloroplastic 
 ppo-u.5   7498235   30S ribosomal protein S1, chloroplastic 
 mtr-u.5   11410196   30S ribosomal protein S1, chloroplastic 
 ghi-r.1   107951587   30S ribosomal protein S1, chloroplastic 
 ghi-r.1   107910559   30S ribosomal protein S1, chloroplastic 
 bna-r.1   111211543   30S ribosomal protein S1, chloroplastic 
 bna-r.1   106348859   30S ribosomal protein S1, chloroplastic-like 
 bna-r.1   106348795   30S ribosomal protein S1, chloroplastic 
 sot-r.1   102588822   30S ribosomal protein S1, chloroplastic-like 
 sot-r.1   102588477   30S ribosomal protein S1, chloroplastic-like 
 cit-r.1   102629225   30S ribosomal protein S1, chloroplastic 
 nta-r.1   107808631   small ribosomal subunit protein bS1c 
 nta-r.1   107800017   small ribosomal subunit protein bS1c 
 cre-r.1   CHLRE_09g394750v5   uncharacterized protein 

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Top 50 coexpressed genes to 123097643 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123097643 (tae-r.2 coexpression data)

CoexMap"123097643"


taeLOC123097643 | Entrez gene ID : 123097643    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 1 1 1 1 3 2 2 1 2 1 2 3 2 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes03010 [list] [network] Ribosome (7602 genes)
GO BP
GO:0006412 [list] [network] translation  (1629 genes)  IEA  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (279 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (862 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (1103 genes)  IEA  
Protein XP_044375373.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  plas 1,  extr 1  (predict for XP_044375373.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_044375373.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123097643
tae-r.2
for
123085699
tae-r.2
for
123092307
hvu-r.1
for
123448789
bdi-r.1
for
100823611
osa-u.5
for
4332652
zma-u.5
for
100283777
sbi-r.1
for
8081054
ath-u.5
for
RPS1
gma-u.5
for
100812847
gma-u.5
for
100810511
gma-u.5
for
100806905
sly-u.5
for
101245144
sly-u.5
for
101247851
bra-r.6
for
103874603
bra-r.6
for
103837311
vvi-u.5
for
100265325
ppo-u.5
for
7485852
ppo-u.5
for
7498235
mtr-u.5
for
11410196
ghi-r.1
for
107951587
ghi-r.1
for
107910559
bna-r.1
for
111211543
bna-r.1
for
106348859
bna-r.1
for
106348795
sot-r.1
for
102588822
sot-r.1
for
102588477
cit-r.1
for
102629225
nta-r.1
for
107808631
nta-r.1
for
107800017
cre-r.1
for
CHLRE_09g394750v5


Ortholog ID: 6981
Species tae tae tae hvu bdi osa zma sbi ath gma gma gma sly sly bra bra vvi ppo ppo mtr ghi ghi bna bna bna sot sot cit nta nta cre
Symbol LOC123097643 LOC123085699 LOC123092307 LOC123448789 LOC100823611 LOC4332652 LOC100283777 LOC8081054 RPS1 LOC100812847 LOC100810511 LOC100806905 LOC101245144 LOC101247851 LOC103874603 LOC103837311 LOC100265325 LOC7485852 LOC7498235 LOC11410196 LOC107951587 LOC107910559 LOC111211543 LOC106348859 LOC125577696 LOC102588822 LOC102588477 LOC102629225 LOC107808631 LOC107800017 CHLRE_09g394750v5
Function* 30S ribosomal protein S1, chloroplastic 30S ribosomal protein S1, chloroplastic 30S ribosomal protein S1, chloroplastic 30S ribosomal protein S1, chloroplastic 30S ribosomal protein S1, chloroplastic small ribosomal subunit protein bS1c 30S ribosomal protein S1,chloroplastic-like 30S ribosomal protein S1, chloroplastic ribosomal protein S1 30S ribosomal protein S1, chloroplastic-like 30S ribosomal protein S1 30S ribosomal protein S1 30S ribosomal protein S1 small ribosomal subunit protein bS1c 30S ribosomal protein S1, chloroplastic 30S ribosomal protein S1, chloroplastic small ribosomal subunit protein bS1c 30S ribosomal protein S1, chloroplastic 30S ribosomal protein S1, chloroplastic 30S ribosomal protein S1, chloroplastic 30S ribosomal protein S1, chloroplastic 30S ribosomal protein S1, chloroplastic 30S ribosomal protein S1, chloroplastic 30S ribosomal protein S1, chloroplastic-like 30S ribosomal protein S1, chloroplastic-like 30S ribosomal protein S1, chloroplastic-like 30S ribosomal protein S1, chloroplastic-like 30S ribosomal protein S1, chloroplastic small ribosomal subunit protein bS1c small ribosomal subunit protein bS1c uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 6
hvu03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 12
bdi00860 Porphyrin metabolism 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 9
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 11
gma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 3
gma01240 Biosynthesis of cofactors 3
gma03060 Protein export 3
gma00970 Aminoacyl-tRNA biosynthesis 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 15
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00710 Carbon fixation by Calvin cycle 6
vvi01200 Carbon metabolism 6
vvi00190 Oxidative phosphorylation 2
vvi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 4
ppo03010 Ribosome 3
ppo00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 9
mtr00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi00260 Glycine, serine and threonine metabolism 3
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
ghi01230 Biosynthesis of amino acids 3
ghi00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi00053 Ascorbate and aldarate metabolism 2
ghi00480 Glutathione metabolism 2
ghi03060 Protein export 2
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
bna00620 Pyruvate metabolism 2
bna00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
bna00620 Pyruvate metabolism 2
bna00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 11
sot01200 Carbon metabolism 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 8
sot01240 Biosynthesis of cofactors 3
sot00061 Fatty acid biosynthesis 2
sot01212 Fatty acid metabolism 2
sot00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta00190 Oxidative phosphorylation 2
nta00195 Photosynthesis 2
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta00190 Oxidative phosphorylation 2
nta00195 Photosynthesis 2
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 9
cre00970 Aminoacyl-tRNA biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123097643 123085699 123092307 123448789 100823611 4332652 100283777 8081054 833138 100812847 100810511 100806905 101245144 101247851 103874603 103837311 100265325 7485852 7498235 11410196 107951587 107910559 111211543 106348859 125577696 102588822 102588477 102629225 107808631 107800017 5720139
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