Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123113104   transcription termination factor MTERF2, chloroplastic 
 tae-r.2   123122629   transcription termination factor MTERF2, chloroplastic 
 tae-r.2   123104819   transcription termination factor MTERF2, chloroplastic 
 hvu-r.1   123397104   transcription termination factor MTERF2, chloroplastic 
 bdi-r.1   100838727   transcription termination factor MTERF2, chloroplastic 
 zma-u.5   103644366   uncharacterized LOC103644366 
 zma-u.5   100383444   uncharacterized LOC100383444 
 sbi-r.1   8077262   transcription termination factor MTERF2, chloroplastic 
 ath-u.5   AT1G78930   Mitochondrial transcription termination factor family protein 
 gma-u.5   100802127   transcription termination factor MTERF2, chloroplastic 
 sly-u.5   101262193   transcription termination factor MTERF2, chloroplastic 
 bra-r.6   103832370   transcription termination factor MTERF2, chloroplastic 
 vvi-u.5   100244378   transcription termination factor MTERF2, chloroplastic 
 ppo-u.5   7465582   transcription termination factor MTERF2, chloroplastic 
 mtr-u.5   25495073   transcription termination factor MTEF1, chloroplastic 
 ghi-r.1   107963495   transcription termination factor MTERF6, chloroplastic/mitochondrial 
 ghi-r.1   107901769   transcription termination factor MTERF2, chloroplastic 
 sot-r.1   102600438   uncharacterized LOC102600438 
 cit-r.1   102616438   transcription termination factor MTERF2, chloroplastic 
 nta-r.1   107769271   uncharacterized LOC107769271 
 nta-r.1   107822071   uncharacterized LOC107822071 
 nta-r.1   142180247   uncharacterized LOC142180247 

close


Top 50 coexpressed genes to 123113104 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 123113104 (tae-r.2 coexpression data)

CoexMap"123113104"


taeLOC123113104 | Entrez gene ID : 123113104    
Species tae hvu bdi zma sbi ath gma sly bra vvi ppo mtr ghi sot cit nta cre osa bna
Paralog 3 1 1 2 1 1 1 1 1 1 1 1 2 1 1 3 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (5253 genes)  IEA  
GO CC
GO MF
GO:0003690 [list] [network] double-stranded DNA binding  (1663 genes)  IEA  
Protein XP_044390176.1 [sequence] [blastp]
XP_044390177.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_044390176.1)
chlo 9  (predict for XP_044390177.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_044390176.1)
chlo 9  (predict for XP_044390177.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123113104
tae-r.2
for
123122629
tae-r.2
for
123104819
hvu-r.1
for
123397104
bdi-r.1
for
100838727
zma-u.5
for
103644366
zma-u.5
for
100383444
sbi-r.1
for
8077262
ath-u.5
for
AT1G78930
gma-u.5
for
100802127
sly-u.5
for
101262193
bra-r.6
for
103832370
vvi-u.5
for
100244378
ppo-u.5
for
7465582
mtr-u.5
for
25495073
ghi-r.1
for
107963495
ghi-r.1
for
107901769
sot-r.1
for
102600438
cit-r.1
for
102616438
nta-r.1
for
107769271
nta-r.1
for
107822071
nta-r.1
for
142180247


Ortholog ID: 10561
Species tae tae tae hvu bdi zma zma sbi ath gma sly bra vvi ppo mtr ghi ghi sot cit nta nta nta
Symbol LOC123113104 LOC123122629 LOC123104819 LOC123397104 LOC100838727 LOC103644366 LOC100383444 LOC8077262 AT1G78930 LOC100802127 LOC101262193 LOC103832370 LOC100244378 LOC7465582 LOC25495073 LOC107963495 LOC107901769 LOC102600438 LOC102616438 LOC107769271 LOC107822071 LOC142180247
Function* transcription termination factor MTERF2, chloroplastic transcription termination factor MTERF2, chloroplastic transcription termination factor MTERF2, chloroplastic transcription termination factor MTERF2, chloroplastic transcription termination factor MTERF2, chloroplastic uncharacterized LOC103644366 uncharacterized LOC100383444 transcription termination factor MTERF2, chloroplastic Mitochondrial transcription termination factor family protein transcription termination factor MTERF2, chloroplastic transcription termination factor MTERF2, chloroplastic transcription termination factor MTERF2, chloroplastic transcription termination factor MTERF2, chloroplastic transcription termination factor MTERF2, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTERF6, chloroplastic/mitochondrial transcription termination factor MTERF2, chloroplastic uncharacterized LOC102600438 transcription termination factor MTERF2, chloroplastic uncharacterized LOC107769271 uncharacterized LOC107822071 uncharacterized LOC142180247
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 2
ath03410 Base excision repair 2
ath03420 Nucleotide excision repair 2
ath03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
sly00260 Glycine, serine and threonine metabolism 2
sly00460 Cyanoamino acid metabolism 2
sly00630 Glyoxylate and dicarboxylate metabolism 2
sly00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 2
bra03410 Base excision repair 2
bra03420 Nucleotide excision repair 2
bra03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 5
ghi00230 Purine metabolism 2
ghi00740 Riboflavin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 6
ghi03015 mRNA surveillance pathway 2
ghi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 3
nta00240 Pyrimidine metabolism 3
nta00250 Alanine, aspartate and glutamate metabolism 3
nta01240 Biosynthesis of cofactors 3
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 3
nta00240 Pyrimidine metabolism 3
nta00250 Alanine, aspartate and glutamate metabolism 3
nta01240 Biosynthesis of cofactors 3
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 3
nta00240 Pyrimidine metabolism 3
nta00250 Alanine, aspartate and glutamate metabolism 3
nta01240 Biosynthesis of cofactors 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123113104 123122629 123104819 123397104 100838727 103644366 100383444 8077262 844232 100802127 101262193 103832370 100244378 7465582 25495073 107963495 107901769 102600438 102616438 107769271 107822071 142180247
The preparation time of this page was 0.1 [sec].