ATTED-II : GeneCoexpression result

Species	Gene	Description
tae-r.2	123123232	histone H1-like
osa-u.5	4335314	histone H1
osa-u.5	4342583	histone H1
osa-u.5	4334439	histone H1
zma-u.5	100382582	histone one (H1)
zma-u.5	103625810	histone H1-like
zma-u.5	542385	histone I
ath-u.5	HIS1-3	histone H1-3
ath-u.5	AT1G06760	winged-helix DNA-binding transcription factor family protein
ath-u.5	AT2G30620	winged-helix DNA-binding transcription factor family protein
gma-u.5	100775944	histone H1
gma-u.5	100810590	histone H1.2-like
gma-u.5	100797229	histone H1
sly-u.5	544142	H1 histone-like protein
sly-u.5	101248710	histone H1-like
sly-u.5	101245495	histone H1-like
vvi-u.5	100245167	histone H1
vvi-u.5	100251147	histone H1
vvi-u.5	100259836	histone H1
ppo-u.5	18099660	histone H1
ppo-u.5	18099218	histone H1
ppo-u.5	7460433	histone H1
mtr-u.5	25501631	histone H1-like
mtr-u.5	25484327	histone H1

Annotation

functional annotation

KEGG

GO BP

GO:0045910 [list] [network] negative regulation of DNA recombination	(50 genes)	IEA
GO:0030261 [list] [network] chromosome condensation	(60 genes)	IEA
GO:0006334 [list] [network] nucleosome assembly	(85 genes)	IEA

GO CC

GO:0000786 [list] [network] nucleosome	(566 genes)	IEA
GO:0005634 [list] [network] nucleus	(8281 genes)	IEA

GO MF

GO:0031492 [list] [network] nucleosomal DNA binding	(38 genes)	IEA
GO:0030527 [list] [network] structural constituent of chromatin	(535 genes)	IEA
GO:0003690 [list] [network] double-stranded DNA binding	(1663 genes)	IEA

Protein

XP_044399639.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9, cyto 1

(predict for XP_044399639.1)

Subcellular
localization
TargetP

other 8

(predict for XP_044399639.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123123232	osa-u.5 for 4335314	osa-u.5 for 4342583	osa-u.5 for 4334439	zma-u.5 for 100382582	zma-u.5 for 103625810	zma-u.5 for 542385	ath-u.5 for HIS1-3	ath-u.5 for AT1G06760	ath-u.5 for AT2G30620	gma-u.5 for 100775944	gma-u.5 for 100810590	gma-u.5 for 100797229	sly-u.5 for 544142	sly-u.5 for 101248710	sly-u.5 for 101245495	vvi-u.5 for 100245167	vvi-u.5 for 100251147	vvi-u.5 for 100259836	ppo-u.5 for 18099660	ppo-u.5 for 18099218	ppo-u.5 for 7460433	mtr-u.5 for 25501631	mtr-u.5 for 25484327

Ortholog

Ortholog ID: 718

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

HIS1-3

Function^*

histone H1-like

histone H1

histone H1-like protein

histone one (H1) 101

histone H1

winged-helix DNA-binding transcription factor family protein

histone H1-3

histone H1

H1/H5 domain-containing protein

histone H1

histone H1-like

histone H1.2

histone H1

histone H1.2

histone H1.2-like

histone H1

histone H1-like

histone H1

uncharacterized LOC107766305

histone H1-like

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03082	ATP-dependent chromatin remodeling	3
bdi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00270	Cysteine and methionine metabolism	2
zma00670	One carbon pool by folate	2
zma01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03082	ATP-dependent chromatin remodeling	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03082	ATP-dependent chromatin remodeling	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03030	DNA replication	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03082	ATP-dependent chromatin remodeling	3

Expression

Expression pattern

Entrez Gene ID^*

123123232

123054116

123452741

123452742

100834570

100833820

4342583

4334439

541964

541973

8057614

8056631

837187

816317

100775944

100306187

778281

101245495

103867940

103837838

100251147

100247613

18099218

18101583

25484327

107894274

107913009

106426396

106406187

102586395

102583906

102618662

102626409

107766305

107808821

5719074

5721745

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 123123232 (tae-r.2 coexpression data)

Top 50 enrichment test to 123123232 (tae-r.2 coexpression data)


Species	tae	osa	zma	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre
Paralog	1	3	3	3	3	3	3	3	2	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123123232 (tae-r.2 coexpression data)

Top 50 enrichment test to 123123232 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**