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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123127294   ribosomal RNA-processing protein 17 
 tae-r.2   123091925   ribosomal RNA-processing protein 17 
 tae-r.2   123144387   ribosomal RNA-processing protein 17 
 hvu-r.1   123448598   ribosomal RNA-processing protein 17 
 bdi-r.1   100827709   nucleolar protein 12 
 osa-u.5   4332857   ribosomal RNA-processing protein 17 
 zma-u.5   103639127   rRNA-processing protein 17 
 sbi-r.1   8082286   ribosomal RNA-processing protein 17 
 ath-u.5   AT1G11240   ribosomal RNA-processing protein 
 gma-u.5   100500570   ribosomal RNA-processing protein 17 
 gma-u.5   100305880   uncharacterized LOC100305880 
 sly-u.5   101244038   nucleolar protein 12 domain-containing protein 
 bra-r.6   103871885   ribosomal RNA-processing protein 17 
 vvi-u.5   100256799   ribosomal RNA-processing protein 17 
 ppo-u.5   7495268   ribosomal RNA-processing protein 17 
 ppo-u.5   7490791   ribosomal RNA-processing protein 17 
 mtr-u.5   11430497   ribosomal RNA-processing protein 17 
 ghi-r.1   107924410   ribosomal RNA-processing protein 17 
 ghi-r.1   107914003   nucleolar protein 12 
 bna-r.1   106350021   ribosomal RNA-processing protein 17 
 bna-r.1   106397441   ribosomal RNA-processing protein 17 
 sot-r.1   102605580   ribosomal RNA-processing protein 17 
 cit-r.1   102626437   ribosomal RNA-processing protein 17 
 nta-r.1   107760445   uncharacterized LOC107760445 
 nta-r.1   107810898   uncharacterized LOC107810898 
 cre-r.1   CHLRE_03g183500v5   uncharacterized protein 

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Top 50 coexpressed genes to 123127294 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123127294 (tae-r.2 coexpression data)

CoexMap"123127294"


taeLOC123127294 | Entrez gene ID : 123127294    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 1 1 1 1 2 1 1 1 2 1 2 2 1 1 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005730 [list] [network] nucleolus  (603 genes)  IEA  
GO MF
GO:0019843 [list] [network] rRNA binding  (243 genes)  IEA  
Protein XP_044402880.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_044402880.1)
Subcellular
localization
TargetP
other 9  (predict for XP_044402880.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123127294
tae-r.2
for
123091925
tae-r.2
for
123144387
hvu-r.1
for
123448598
bdi-r.1
for
100827709
osa-u.5
for
4332857
zma-u.5
for
103639127
sbi-r.1
for
8082286
ath-u.5
for
AT1G11240
gma-u.5
for
100500570
gma-u.5
for
100305880
sly-u.5
for
101244038
bra-r.6
for
103871885
vvi-u.5
for
100256799
ppo-u.5
for
7495268
ppo-u.5
for
7490791
mtr-u.5
for
11430497
ghi-r.1
for
107924410
ghi-r.1
for
107914003
bna-r.1
for
106350021
bna-r.1
for
106397441
sot-r.1
for
102605580
cit-r.1
for
102626437
nta-r.1
for
107760445
nta-r.1
for
107810898
cre-r.1
for
CHLRE_03g183500v5


Ortholog ID: 9769
Species tae tae tae hvu bdi osa zma sbi ath gma gma sly bra vvi ppo ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC123127294 LOC123091925 LOC123144387 LOC123448598 LOC100827709 LOC4332857 LOC103639127 LOC8082286 AT1G11240 LOC100500570 LOC100305880 LOC101244038 LOC103871885 LOC100256799 LOC7495268 LOC7490791 LOC11430497 LOC107924410 LOC107914003 LOC106350021 LOC106397441 LOC102605580 LOC102626437 LOC107760445 LOC107810898 CHLRE_03g183500v5
Function* ribosomal RNA-processing protein 17 ribosomal RNA-processing protein 17 ribosomal RNA-processing protein 17 ribosomal RNA-processing protein 17 nucleolar protein 12 ribosomal RNA-processing protein 17 rRNA-processing protein 17 ribosomal RNA-processing protein 17 ribosomal RNA-processing protein ribosomal RNA-processing protein 17 uncharacterized LOC100305880 nucleolar protein 12 domain-containing protein ribosomal RNA-processing protein 17 ribosomal RNA-processing protein 17 ribosomal RNA-processing protein 17 ribosomal RNA-processing protein 17 ribosomal RNA-processing protein 17 ribosomal RNA-processing protein 17 nucleolar protein 12 ribosomal RNA-processing protein 17 ribosomal RNA-processing protein 17 ribosomal RNA-processing protein 17 ribosomal RNA-processing protein 17 uncharacterized LOC107760445 uncharacterized LOC107810898 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae03008 Ribosome biogenesis in eukaryotes 3
tae03050 Proteasome 2
tae03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 4
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 9
zma03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
gma03040 Spliceosome 2
gma03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 6
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
sot03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 3
nta03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 3
nta03050 Proteasome 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
cre00190 Oxidative phosphorylation 2
cre04145 Phagosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123127294 123091925 123144387 123448598 100827709 4332857 103639127 8082286 837665 100500570 100305880 101244038 103871885 100256799 7495268 7490791 11430497 107924410 107914003 106350021 106397441 102605580 102626437 107760445 107810898 5728470
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