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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123128005   pentatricopeptide repeat-containing protein At1g05750, chloroplastic 
 bdi-r.1   100825222   pentatricopeptide repeat-containing protein At1g11290, chloroplastic 
 osa-u.5   107280019   pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like 
 sbi-r.1   8076035   pentatricopeptide repeat-containing protein At1g11290, chloroplastic 
 vvi-u.5   104881105   pentatricopeptide repeat-containing protein At4g39530 
 ghi-r.1   107947784   pentatricopeptide repeat-containing protein DOT4, chloroplastic 
 ghi-r.1   121220341   pentatricopeptide repeat-containing protein At4g21300 

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Top 50 coexpressed genes to 123128005 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123128005 (tae-r.2 coexpression data)

CoexMap"123128005"


taeLOC123128005 | Entrez gene ID : 123128005    
Species tae bdi osa sbi vvi ghi hvu sot sly nta bna ppo zma cre mtr ath gma bra cit
Paralog 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (1066 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (15494 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (4004 genes)  IEA  
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044403829.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 2,  vacu 1,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for XP_044403829.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_044403829.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123128005
bdi-r.1
for
100825222
osa-u.5
for
107280019
sbi-r.1
for
8076035
vvi-u.5
for
104881105
ghi-r.1
for
107947784
ghi-r.1
for
121220341


Ortholog ID: 16976
Species tae bdi osa sbi vvi ghi ghi
Symbol LOC123128005 LOC100825222 LOC107280019 LOC8076035 LOC104881105 LOC107947784 LOC121220341
Function* pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein At1g11290, chloroplastic pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like pentatricopeptide repeat-containing protein At1g11290, chloroplastic pentatricopeptide repeat-containing protein At4g39530 pentatricopeptide repeat-containing protein DOT4, chloroplastic pentatricopeptide repeat-containing protein At4g21300
Coexmap

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Coexpression

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KEGG Info
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123128005 100825222 107280019 8076035 104881105 107947784 121220341
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