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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123128795   probable E3 ubiquitin-protein ligase HIP1 
 osa-u.5   4340307   receptor homology region, transmembrane domain- and RING domain-containing protein 6 
 osa-u.5   4331022   uncharacterized LOC4331022 
 zma-u.5   103627863   RING/U-box superfamily protein 
 zma-u.5   100283924   uncharacterized LOC100283924 
 ath-u.5   AT2G15580   RING/U-box superfamily protein 
 gma-u.5   100790524   probable E3 ubiquitin-protein ligase RHY1A 
 gma-u.5   100500350   uncharacterized LOC100500350 
 gma-u.5   100527583   uncharacterized LOC100527583 
 sly-u.5   101250706   probable E3 ubiquitin-protein ligase RHY1A 
 vvi-u.5   100241393   probable E3 ubiquitin-protein ligase RHY1A 
 ppo-u.5   7470041   probable E3 ubiquitin-protein ligase RHY1A 
 mtr-u.5   25488383   probable E3 ubiquitin-protein ligase RHY1A 

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Top 50 coexpressed genes to 123128795 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123128795 (tae-r.2 coexpression data)

CoexMap"123128795"


taeLOC123128795 | Entrez gene ID : 123128795    
Species tae osa zma ath gma sly vvi ppo mtr bdi hvu bra cit bna sbi ghi sot nta cre
Paralog 1 2 2 1 3 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (881 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (8281 genes)  IEA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (667 genes)  IEA  
Protein XP_044404828.1 [sequence] [blastp]
XP_044404829.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 2,  mito 1  (predict for XP_044404828.1)
nucl 6,  mito 2,  chlo 1  (predict for XP_044404829.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_044404828.1)
mito 8  (predict for XP_044404829.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123128795
osa-u.5
for
4340307
osa-u.5
for
4331022
zma-u.5
for
103627863
zma-u.5
for
100283924
ath-u.5
for
AT2G15580
gma-u.5
for
100790524
gma-u.5
for
100500350
gma-u.5
for
100527583
sly-u.5
for
101250706
vvi-u.5
for
100241393
ppo-u.5
for
7470041
mtr-u.5
for
25488383


Ortholog ID: 3901
Species tae hvu hvu bdi bdi osa osa zma zma sbi sbi ath gma gma sly bra vvi ppo mtr ghi ghi bna bna sot sot cit nta nta
Symbol LOC123165795 LOC123412783 LOC123402617 LOC100830912 LOC100833275 LOC4331022 LOC4340307 LOC100283924 LOC103627863 LOC110431252 LOC8056392 AT2G15580 LOC100500350 LOC100527583 LOC101250706 LOC103844355 LOC100241393 LOC7470041 LOC25488383 LOC121225243 LOC107962551 LOC106361630 LOC106445638 LOC102590358 LOC102590705 LOC102616965 LOC107801626 LOC107759976
Function* E3 ubiquitin-protein ligase Iruka E3 ubiquitin-protein ligase TTC3-like uncharacterized LOC123402617 uncharacterized LOC100830912 probable E3 ubiquitin-protein ligase RHY1A uncharacterized LOC4331022 receptor homology region, transmembrane domain- and RING domain-containing protein 6 uncharacterized LOC100283924 RING/U-box superfamily protein E3 ubiquitin-protein ligase RLIM-like RING-H2 finger protein ATL80 RING/U-box superfamily protein uncharacterized LOC100500350 uncharacterized LOC100527583 probable E3 ubiquitin-protein ligase RHY1A probable E3 ubiquitin-protein ligase RHY1A probable E3 ubiquitin-protein ligase RHY1A probable E3 ubiquitin-protein ligase RHY1A probable E3 ubiquitin-protein ligase RHY1A E3 ubiquitin-protein ligase ZNRF3 uncharacterized LOC107962551 probable E3 ubiquitin-protein ligase RHY1A probable E3 ubiquitin-protein ligase RHY1A E3 ubiquitin-protein ligase RING1-like uncharacterized LOC102590705 probable E3 ubiquitin-protein ligase RHY1A uncharacterized LOC107801626 uncharacterized LOC107759976
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 4
cit00630 Glyoxylate and dicarboxylate metabolism 3
cit00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 3
nta04016 MAPK signaling pathway - plant 2
nta04070 Phosphatidylinositol signaling system 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123165795 123412783 123402617 100830912 100833275 4331022 4340307 100283924 103627863 110431252 8056392 816051 100500350 100527583 101250706 103844355 100241393 7470041 25488383 121225243 107962551 106361630 106445638 102590358 102590705 102616965 107801626 107759976
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