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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123136337   DNA-directed RNA polymerase V subunit 1 
 tae-r.2   123143843   DNA-directed RNA polymerase V subunit 1 
 tae-r.2   123132286   DNA-directed RNA polymerase V subunit 1 
 hvu-r.1   123401596   DNA-directed RNA polymerase V subunit 1 
 bdi-r.1   100825545   DNA-directed RNA polymerase V subunit 1 
 osa-u.5   4328330   DNA-directed RNA polymerase V subunit 1 
 zma-u.5   103654914   DNA-directed RNA polymerase V subunit 1 
 sbi-r.1   8069982   DNA-directed RNA polymerase V subunit 1 
 ath-u.5   NRPD1B   nuclear RNA polymerase D1B 
 gma-u.5   100801412   DNA-directed RNA polymerase V subunit 1 
 gma-u.5   100785844   DNA-directed RNA polymerase V subunit 1 
 sly-u.5   778258   DNA-directed RNA polymerase V subunit 1 
 vvi-u.5   100266900   DNA-directed RNA polymerase V subunit 1 
 ppo-u.5   7460237   DNA-directed RNA polymerase V subunit 1 
 mtr-u.5   11445115   DNA-directed RNA polymerase V subunit 1 
 ghi-r.1   107962354   DNA-directed RNA polymerase V subunit 1 
 ghi-r.1   107928093   DNA-directed RNA polymerase V subunit 1 
 bna-r.1   106438049   DNA-directed RNA polymerase V subunit 1 
 bna-r.1   106420756   DNA-directed RNA polymerase V subunit 1-like 
 cit-r.1   102606620   DNA-directed RNA polymerase V subunit 1 
 nta-r.1   107772945   DNA-directed RNA polymerase V subunit 1 
 nta-r.1   107779009   DNA-directed RNA polymerase V subunit 1 

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Top 50 coexpressed genes to 123136337 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123136337 (tae-r.2 coexpression data)

CoexMap"123136337"


taeLOC123136337 | Entrez gene ID : 123136337    
Species tae hvu bdi osa zma sbi ath gma sly vvi ppo mtr ghi bna cit nta bra sot cre
Paralog 3 1 1 1 1 1 1 2 1 1 1 1 2 2 1 2 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes03020 [list] [network] RNA polymerase (173 genes)
GO BP
GO:0006351 [list] [network] DNA-templated transcription  (790 genes)  IEA  
GO CC
GO MF
GO:0003899 [list] [network] DNA-directed RNA polymerase activity  (50 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (6662 genes)  IEA  
Protein XP_044411639.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 2,  cysk_nucl 1,  chlo 1,  mito 1,  plas 1,  extr 1,  chlo_mito 1,  mito_plas 1  (predict for XP_044411639.1)
Subcellular
localization
TargetP
other 7  (predict for XP_044411639.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123136337
tae-r.2
for
123143843
tae-r.2
for
123132286
hvu-r.1
for
123401596
bdi-r.1
for
100825545
osa-u.5
for
4328330
zma-u.5
for
103654914
sbi-r.1
for
8069982
ath-u.5
for
NRPD1B
gma-u.5
for
100801412
gma-u.5
for
100785844
sly-u.5
for
778258
vvi-u.5
for
100266900
ppo-u.5
for
7460237
mtr-u.5
for
11445115
ghi-r.1
for
107962354
ghi-r.1
for
107928093
bna-r.1
for
106438049
bna-r.1
for
106420756
cit-r.1
for
102606620
nta-r.1
for
107772945
nta-r.1
for
107779009


Ortholog ID: 10708
Species tae tae tae hvu bdi osa zma sbi ath gma gma sly vvi ppo mtr ghi ghi bna bna cit nta nta
Symbol LOC123136337 LOC123143843 LOC123132286 LOC123401596 LOC100825545 LOC4328330 LOC103654914 LOC8069982 NRPD1B LOC100801412 LOC100785844 LOC778258 LOC100266900 LOC7460237 LOC11445115 LOC107962354 LOC107928093 LOC106438049 LOC106420756 LOC102606620 LOC107772945 LOC107779009
Function* DNA-directed RNA polymerase V subunit 1 DNA-directed RNA polymerase V subunit 1 DNA-directed RNA polymerase V subunit 1 DNA-directed RNA polymerase V subunit 1 DNA-directed RNA polymerase V subunit 1 DNA-directed RNA polymerase V subunit 1 DNA-directed RNA polymerase V subunit 1 DNA-directed RNA polymerase V subunit 1 nuclear RNA polymerase D1B DNA-directed RNA polymerase V subunit 1 DNA-directed RNA polymerase V subunit 1 DNA-directed RNA polymerase V subunit 1 DNA-directed RNA polymerase V subunit 1 DNA-directed RNA polymerase V subunit 1 DNA-directed RNA polymerase V subunit 1 DNA-directed RNA polymerase V subunit 1 DNA-directed RNA polymerase V subunit 1 DNA-directed RNA polymerase V subunit 1 DNA-directed RNA polymerase V subunit 1-like DNA-directed RNA polymerase V subunit 1 DNA-directed RNA polymerase V subunit 1 DNA-directed RNA polymerase V subunit 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 6
tae04075 Plant hormone signal transduction 2
tae03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 6
tae03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 4
sbi03082 ATP-dependent chromatin remodeling 3
sbi03040 Spliceosome 3
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03410 Base excision repair 3
ath03440 Homologous recombination 2
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 4
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03020 RNA polymerase 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 4
ghi03013 Nucleocytoplasmic transport 2
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 4
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 4
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 4
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 2
nta03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123136337 123143843 123132286 123401596 100825545 4328330 103654914 8069982 818591 100801412 100785844 778258 100266900 7460237 11445115 107962354 107928093 106438049 106420756 102606620 107772945 107779009
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