ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
tae-r.2	123138133	uncharacterized LOC123138133
tae-r.2	123187661	uncharacterized LOC123187661
tae-r.2	123043874	uncharacterized LOC123043874
tae-r.2	123051748	uncharacterized LOC123051748
hvu-r.1	123411411	uncharacterized LOC123411411
hvu-r.1	123406157	uncharacterized LOC123406157
hvu-r.1	123401816	uncharacterized LOC123401816
bdi-r.1	100834977	uncharacterized LOC100834977
bdi-r.1	100839308	uncharacterized LOC100839308
bdi-r.1	100824092	uncharacterized LOC100824092
osa-u.5	4345572	uncharacterized LOC4345572
osa-u.5	4340723	uncharacterized LOC4340723
osa-u.5	4330615	uncharacterized LOC4330615
zma-u.5	100276420	uncharacterized LOC100276420
zma-u.5	100276874	uncharacterized LOC100276874
zma-u.5	100381837	NHL domain-containing protein
sbi-r.1	8073549	uncharacterized LOC8073549
sbi-r.1	8073818	uncharacterized LOC8073818
sbi-r.1	8061543	uncharacterized LOC8061543
ath-u.5	AT3G14860	NHL domain-containing protein
ath-u.5	AT5G14890	potassium transporter
ath-u.5	AT1G23880	NHL domain-containing protein
gma-u.5	100799483	uncharacterized LOC100799483
gma-u.5	100797841	uncharacterized LOC100797841
sly-u.5	101246450	uncharacterized LOC101246450
sly-u.5	101247577	uncharacterized LOC101247577
sly-u.5	101255990	uncharacterized LOC101255990
bra-r.6	103851236	uncharacterized LOC103851236
bra-r.6	103859595	uncharacterized LOC103859595
vvi-u.5	100243227	uncharacterized LOC100243227
vvi-u.5	100263777	uncharacterized LOC100263777
vvi-u.5	100245328	uncharacterized LOC100245328
ppo-u.5	7493556	uncharacterized LOC7493556
ppo-u.5	18095451	uncharacterized LOC18095451
ppo-u.5	7459053	uncharacterized LOC7459053
mtr-u.5	11416686	uncharacterized LOC11416686
mtr-u.5	25495203	uncharacterized LOC25495203
mtr-u.5	25501282	uncharacterized LOC25501282
ghi-r.1	107958576	uncharacterized LOC107958576
ghi-r.1	107939214	uncharacterized LOC107939214
ghi-r.1	107933404	uncharacterized LOC107933404
bna-r.1	BNAC03G38770D	uncharacterized BNAC03G38770D
bna-r.1	106347239	uncharacterized LOC106347239
bna-r.1	106347240	uncharacterized LOC106347240
sot-r.1	102586185	uncharacterized LOC102586185
sot-r.1	102585637	uncharacterized LOC102585637
sot-r.1	102584279	uncharacterized LOC102584279
cit-r.1	102628926	uncharacterized LOC102628926
cit-r.1	102629403	hypothetical protein
cit-r.1	102628107	uncharacterized LOC102628107
nta-r.1	107773447	uncharacterized LOC107773447
nta-r.1	107775734	uncharacterized LOC107775734
nta-r.1	107820985	uncharacterized LOC107820985

Top 50 coexpressed genes to 123138133 (tae-r.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123138133 (tae-r.2 coexpression data)

CoexMap"123138133"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_044413976.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, plas 4, vacu 1, E.R. 1, golg 1

(predict for XP_044413976.1)

Subcellular
localization
TargetP

scret 6

(predict for XP_044413976.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123138133	tae-r.2 for 123187661	tae-r.2 for 123043874	tae-r.2 for 123051748	hvu-r.1 for 123411411	hvu-r.1 for 123406157	hvu-r.1 for 123401816	bdi-r.1 for 100834977	bdi-r.1 for 100839308	bdi-r.1 for 100824092	osa-u.5 for 4345572	osa-u.5 for 4340723	osa-u.5 for 4330615	zma-u.5 for 100276420	zma-u.5 for 100276874	zma-u.5 for 100381837	sbi-r.1 for 8073549	sbi-r.1 for 8073818	sbi-r.1 for 8061543	ath-u.5 for AT3G14860	ath-u.5 for AT5G14890	ath-u.5 for AT1G23880	gma-u.5 for 100799483	gma-u.5 for 100797841	sly-u.5 for 101246450	sly-u.5 for 101247577	sly-u.5 for 101255990	bra-r.6 for 103851236	bra-r.6 for 103859595	vvi-u.5 for 100243227	vvi-u.5 for 100263777	vvi-u.5 for 100245328	ppo-u.5 for 7493556	ppo-u.5 for 18095451	ppo-u.5 for 7459053	mtr-u.5 for 11416686	mtr-u.5 for 25495203	mtr-u.5 for 25501282	ghi-r.1 for 107958576	ghi-r.1 for 107939214	ghi-r.1 for 107933404	bna-r.1 for BNAC03G38770D	bna-r.1 for 106347239	bna-r.1 for 106347240	sot-r.1 for 102586185	sot-r.1 for 102585637	sot-r.1 for 102584279	cit-r.1 for 102628926	cit-r.1 for 102629403	cit-r.1 for 102628107	nta-r.1 for 107773447	nta-r.1 for 107775734	nta-r.1 for 107820985

Ortholog

Ortholog ID: 709

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

uncharacterized LOC123156753

uncharacterized LOC123150357

uncharacterized LOC123137286

uncharacterized LOC123406157

uncharacterized LOC123401816

uncharacterized LOC123424925

uncharacterized LOC100839308

uncharacterized LOC100824092

uncharacterized LOC104584212

uncharacterized LOC4345572

uncharacterized LOC4330615

uncharacterized LOC4328817

uncharacterized LOC100276874

uncharacterized LOC100384592

uncharacterized LOC100276297

uncharacterized LOC8073549

uncharacterized LOC8073818

uncharacterized LOC8061543

NHL domain-containing protein

uncharacterized LOC100797570

uncharacterized LOC100793916

uncharacterized LOC100781836

uncharacterized LOC101247577

uncharacterized LOC101255990

uncharacterized LOC101256281

uncharacterized LOC103831565

uncharacterized LOC103846452

uncharacterized LOC100243227

uncharacterized LOC100245328

uncharacterized LOC100266244

uncharacterized LOC18095451

uncharacterized LOC18106640

uncharacterized LOC11416686

uncharacterized LOC25501282

uncharacterized LOC25501285

uncharacterized LOC107958576

uncharacterized LOC107898670

uncharacterized LOC107960332

uncharacterized LOC106401544

RING finger protein nhl-1

uncharacterized LOC102586185

uncharacterized LOC102585637

uncharacterized LOC102585981

uncharacterized LOC102628926

hypothetical protein

uncharacterized LOC102628107

uncharacterized LOC107773447

uncharacterized LOC107801174

uncharacterized LOC107805830

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03020	RNA polymerase	2
hvu03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00190	Oxidative phosphorylation	2
bdi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03020	RNA polymerase	2
bdi03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01230	Biosynthesis of amino acids	5
zma01210	2-Oxocarboxylic acid metabolism	4
zma00290	Valine, leucine and isoleucine biosynthesis	3
zma00770	Pantothenate and CoA biosynthesis	3
zma00650	Butanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	6
sbi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04145	Phagosome	4
sly04517	IgSF CAM signaling	4
sly04814	Motor proteins	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04145	Phagosome	2
vvi04517	IgSF CAM signaling	2
vvi04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00010	Glycolysis / Gluconeogenesis	2
ppo00030	Pentose phosphate pathway	2
ppo01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	4
mtr04141	Protein processing in endoplasmic reticulum	3
mtr03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04814	Motor proteins	3
ghi00290	Valine, leucine and isoleucine biosynthesis	2
ghi00660	C5-Branched dibasic acid metabolism	2
ghi01210	2-Oxocarboxylic acid metabolism	2
ghi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00562	Inositol phosphate metabolism	6
bna00564	Glycerophospholipid metabolism	4
bna00565	Ether lipid metabolism	4
bna00053	Ascorbate and aldarate metabolism	2
bna01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01200	Carbon metabolism	2
cit00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	3
nta00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00100	Steroid biosynthesis	2
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00270	Cysteine and methionine metabolism	2
nta00670	One carbon pool by folate	2
nta04981	Folate transport and metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

123156753

123150357

123137286

123406157

123401816

123424925

100839308

100824092

104584212

4345572

4330615

4328817

100276874

100384592

100276297

8073549

8073818

8061543

838999

839000

843364

100797570

100793916

100781836

101247577

101255990

101256281

103831565

103846452

100243227

100245328

100266244

18095451

18106640

11416686

25501282

25501285

107958576

107898670

107960332

106401544

106401546

102586185

102585637

102585981

102628926

102629403

102628107

107773447

107801174

107805830

The preparation time of this page was 1.6 [sec].


Species	tae	hvu	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	3	3	3	3	3	3	2	3	2	3	3	3	3	3	3	3	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123138133 (tae-r.2 coexpression data)

Top 50 enrichment test to 123138133 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**