ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
tae-r.2	123138254	uncharacterized LOC123138254
tae-r.2	123145513	endochitinase A
tae-r.2	123128395	uncharacterized LOC123128395
tae-r.2	123128394	uncharacterized LOC123128394
hvu-r.1	123401861	microtubule-associated protein futsch-like
hvu-r.1	123402758	uncharacterized LOC123402758
bdi-r.1	100838793	uncharacterized LOC100838793
bdi-r.1	100824814	uncharacterized LOC100824814
osa-u.5	4330692	uncharacterized LOC4330692
osa-u.5	4330691	uncharacterized LOC4330691
zma-u.5	103652964	uncharacterized LOC103652964
zma-u.5	103638899	uncharacterized LOC103638899
zma-u.5	103637703	uncharacterized LOC103637703
sbi-r.1	110433336	uncharacterized LOC110433336
sbi-r.1	8055610	uncharacterized LOC8055610
ath-u.5	SUO	protein SUO
ath-u.5	AT3G48060	BAH and TFIIS domain-containing protein
gma-u.5	100806155	uncharacterized LOC100806155
gma-u.5	100796021	uncharacterized LOC100796021
gma-u.5	100780436	uncharacterized LOC100780436
sly-u.5	101255308	BAH domain-containing protein, putative
sly-u.5	101252674	uncharacterized LOC101252674
bra-r.6	103837430	uncharacterized LOC103837430
bra-r.6	103837431	uncharacterized LOC103837431
vvi-u.5	100252575	uncharacterized LOC100252575
vvi-u.5	100248456	uncharacterized LOC100248456
ppo-u.5	7474885	uncharacterized LOC7474885
ppo-u.5	7458023	uncharacterized LOC7458023
ppo-u.5	7474882	uncharacterized LOC7474882
mtr-u.5	25495221	uncharacterized LOC25495221
ghi-r.1	107890907	uncharacterized LOC107890907
ghi-r.1	107944116	uncharacterized LOC107944116
ghi-r.1	107939786	mucin-19
bna-r.1	111212185	uncharacterized LOC111212185
bna-r.1	125598862	uncharacterized LOC125598862
bna-r.1	125598859	uncharacterized LOC125598859
sot-r.1	102588004	uncharacterized LOC102588004
cit-r.1	102607643	uncharacterized LOC102607643
cit-r.1	102607943	uncharacterized LOC102607943
nta-r.1	107821904	uncharacterized LOC107821904
nta-r.1	107776440	uncharacterized LOC107776440
nta-r.1	107791989	uncharacterized LOC107791989

Top 50 coexpressed genes to 123138254 (tae-r.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123138254 (tae-r.2 coexpression data)

CoexMap"123138254"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005634 [list] [network] nucleus

(8281 genes)

IEA

GO MF

GO:0003682 [list] [network] chromatin binding

(441 genes)

IEA

Protein

XP_044414130.1 [sequence] [blastp]
XP_044414131.1 [sequence] [blastp]
XP_044414132.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 10	(predict for XP_044414130.1)
chlo 10	(predict for XP_044414131.1)
chlo 10	(predict for XP_044414132.1)

Subcellular
localization
TargetP

mito 6	(predict for XP_044414130.1)
mito 6	(predict for XP_044414131.1)
mito 6	(predict for XP_044414132.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123138254	tae-r.2 for 123145513	tae-r.2 for 123128395	tae-r.2 for 123128394	hvu-r.1 for 123401861	hvu-r.1 for 123402758	bdi-r.1 for 100838793	bdi-r.1 for 100824814	osa-u.5 for 4330692	osa-u.5 for 4330691	zma-u.5 for 103652964	zma-u.5 for 103638899	zma-u.5 for 103637703	sbi-r.1 for 110433336	sbi-r.1 for 8055610	ath-u.5 for SUO	ath-u.5 for AT3G48060	gma-u.5 for 100806155	gma-u.5 for 100796021	gma-u.5 for 100780436	sly-u.5 for 101255308	sly-u.5 for 101252674	bra-r.6 for 103837430	bra-r.6 for 103837431	vvi-u.5 for 100252575	vvi-u.5 for 100248456	ppo-u.5 for 7474885	ppo-u.5 for 7458023	ppo-u.5 for 7474882	mtr-u.5 for 25495221	ghi-r.1 for 107890907	ghi-r.1 for 107944116	ghi-r.1 for 107939786	bna-r.1 for 111212185	bna-r.1 for 125598862	bna-r.1 for 125598859	sot-r.1 for 102588004	cit-r.1 for 102607643	cit-r.1 for 102607943	nta-r.1 for 107821904	nta-r.1 for 107776440	nta-r.1 for 107791989

Ortholog

Ortholog ID: 2823

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

SUO

Function^*

endochitinase A

uncharacterized LOC123128394

uncharacterized LOC123145514

microtubule-associated protein futsch-like

uncharacterized LOC123402758

uncharacterized LOC100838793

uncharacterized LOC100824814

uncharacterized LOC4330692

uncharacterized LOC4330691

uncharacterized LOC103652964

uncharacterized LOC103638899

uncharacterized LOC103637703

uncharacterized LOC110433336

uncharacterized LOC8055610

protein SUO

BAH and TFIIS domain-containing protein

uncharacterized LOC100806155

uncharacterized LOC112998769

uncharacterized LOC100788512

BAH domain-containing protein, putative

uncharacterized LOC101252674

uncharacterized LOC103837430

uncharacterized LOC103837431

uncharacterized LOC100252575

uncharacterized LOC100248456

uncharacterized LOC7474885

uncharacterized LOC7458023

uncharacterized LOC7474882

uncharacterized LOC25495221

uncharacterized LOC107944116

uncharacterized LOC107902540

uncharacterized LOC125598862

uncharacterized LOC125598859

uncharacterized LOC106362715

uncharacterized LOC102588004

uncharacterized LOC102607643

uncharacterized LOC102607943

uncharacterized LOC107821904

uncharacterized LOC107791989

uncharacterized LOC107810712

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00620	Pyruvate metabolism	3
tae00710	Carbon fixation by Calvin cycle	3
tae01200	Carbon metabolism	3
tae04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04712	Circadian rhythm - plant	2
zma03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	2
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03015	mRNA surveillance pathway	3
bra00562	Inositol phosphate metabolism	2
bra04070	Phosphatidylinositol signaling system	2
bra03083	Polycomb repressive complex	2
bra03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	3
ppo03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04141	Protein processing in endoplasmic reticulum	2
bna00270	Cysteine and methionine metabolism	2
bna04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04141	Protein processing in endoplasmic reticulum	2
bna03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	5
cit04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03082	ATP-dependent chromatin remodeling	2
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03082	ATP-dependent chromatin remodeling	2

Expression

Expression pattern

Entrez Gene ID^*

123145513

123128394

123145514

123401861

123402758

100838793

100824814

4330692

4330691

103652964

103638899

103637703

110433336

8055610

823960

823961

100806155

112998769

100788512

101255308

101252674

103837430

103837431

100252575

100248456

7474885

7458023

7474882

25495221

107944116

107902540

125598862

125598859

106362715

102588004

102607643

102607943

107821904

107791989

107810712

The preparation time of this page was 0.2 [sec].


Species	tae	hvu	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	2	2	2	3	2	2	3	2	2	2	3	1	3	3	1	2	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123138254 (tae-r.2 coexpression data)

Top 50 enrichment test to 123138254 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**