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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123145708   protein DCL, chloroplastic 
 tae-r.2   123138456   protein DCL, chloroplastic 
 tae-r.2   123128585   protein DCL, chloroplastic 
 hvu-r.1   123402598   protein DCL, chloroplastic 
 bdi-r.1   100833797   protein DCL, chloroplastic 
 osa-u.5   4330836   protein DCL homolog, chloroplastic 
 zma-u.5   100273638   uncharacterized LOC100273638 
 sbi-r.1   8078921   protein DCL, chloroplastic 
 ath-u.5   AT1G45230   DCL protein (DUF3223) 
 gma-u.5   100527410   uncharacterized LOC100527410 
 gma-u.5   100306718   uncharacterized LOC100306718 
 sly-u.5   DCL   protein DCL, chloroplastic 
 vvi-u.5   100252324   protein DCL homolog, chloroplastic 
 vvi-u.5   100245587   protein DCL, chloroplastic-like 
 ppo-u.5   18104884   protein DCL, chloroplastic 
 ppo-u.5   7462881   protein DCL, chloroplastic 
 mtr-u.5   11435199   protein DCL homolog, chloroplastic 
 ghi-r.1   107910223   protein DCL homolog, chloroplastic 
 ghi-r.1   121203083   protein DCL homolog, chloroplastic 
 ghi-r.1   107923113   protein DCL homolog, chloroplastic 
 bna-r.1   106371875   protein DCL homolog, chloroplastic-like 
 bna-r.1   106380623   protein DCL homolog, chloroplastic 
 sot-r.1   102595787   protein DCL, chloroplastic 
 cit-r.1   102609741   protein DCL homolog, chloroplastic 
 nta-r.1   107824386   protein DCL, chloroplastic 
 nta-r.1   107794355   protein DCL, chloroplastic 

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Top 50 coexpressed genes to 123145708 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123145708 (tae-r.2 coexpression data)

CoexMap"123145708"


taeLOC123145708 | Entrez gene ID : 123145708    
Species tae hvu bdi osa zma sbi ath gma sly vvi ppo mtr ghi bna sot cit nta bra cre
Paralog 3 1 1 1 1 1 1 2 1 2 2 1 3 2 1 1 2 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:1901259 [list] [network] chloroplast rRNA processing  (54 genes)  IEA  
GO:0009658 [list] [network] chloroplast organization  (164 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (1890 genes)  IEA  
GO MF
Protein XP_044421118.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_044421118.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_044421118.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123145708
tae-r.2
for
123138456
tae-r.2
for
123128585
hvu-r.1
for
123402598
bdi-r.1
for
100833797
osa-u.5
for
4330836
zma-u.5
for
100273638
sbi-r.1
for
8078921
ath-u.5
for
AT1G45230
gma-u.5
for
100527410
gma-u.5
for
100306718
sly-u.5
for
DCL
vvi-u.5
for
100252324
vvi-u.5
for
100245587
ppo-u.5
for
18104884
ppo-u.5
for
7462881
mtr-u.5
for
11435199
ghi-r.1
for
107910223
ghi-r.1
for
121203083
ghi-r.1
for
107923113
bna-r.1
for
106371875
bna-r.1
for
106380623
sot-r.1
for
102595787
cit-r.1
for
102609741
nta-r.1
for
107824386
nta-r.1
for
107794355


Ortholog ID: 8734
Species tae tae tae hvu bdi osa zma sbi ath gma gma sly vvi vvi ppo ppo mtr ghi ghi ghi bna bna sot cit nta nta
Symbol LOC123145708 LOC123138456 LOC123128585 LOC123402598 LOC100833797 LOC4330836 LOC100273638 LOC8078921 AT1G45230 LOC100527410 LOC100306718 DCL LOC100252324 LOC100245587 LOC18104884 LOC7462881 LOC11435199 LOC107910223 LOC121203083 LOC107910745 LOC106371875 LOC106380623 LOC102595787 LOC102609741 LOC107824386 LOC107794355
Function* protein DCL, chloroplastic protein DCL, chloroplastic protein DCL, chloroplastic protein DCL, chloroplastic protein DCL, chloroplastic protein DCL homolog, chloroplastic uncharacterized LOC100273638 protein DCL, chloroplastic DCL protein (DUF3223) uncharacterized LOC100527410 uncharacterized LOC100306718 protein DCL, chloroplastic protein DCL homolog, chloroplastic protein DCL, chloroplastic-like protein DCL, chloroplastic protein DCL, chloroplastic protein DCL homolog, chloroplastic protein DCL homolog, chloroplastic protein DCL homolog, chloroplastic protein DCL homolog, chloroplastic protein DCL homolog, chloroplastic-like protein DCL homolog, chloroplastic protein DCL, chloroplastic protein DCL homolog, chloroplastic protein DCL, chloroplastic protein DCL, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 3
tae03420 Nucleotide excision repair 3
tae03430 Mismatch repair 3
tae03440 Homologous recombination 3
tae03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 2
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi04141 Protein processing in endoplasmic reticulum 4
ghi04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 4
bna00630 Glyoxylate and dicarboxylate metabolism 4
bna00670 One carbon pool by folate 4
bna00785 Lipoic acid metabolism 4
bna01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
nta00450 Selenocompound metabolism 2
nta00740 Riboflavin metabolism 2
nta00790 Folate biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00450 Selenocompound metabolism 2
nta00970 Aminoacyl-tRNA biosynthesis 2
nta00740 Riboflavin metabolism 2
nta00790 Folate biosynthesis 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123145708 123138456 123128585 123402598 100833797 4330836 100273638 8078921 841096 100527410 100306718 544019 100252324 100245587 18104884 7462881 11435199 107910223 121203083 107910745 106371875 106380623 102595787 102609741 107824386 107794355
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