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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123148236   E3 ubiquitin-protein ligase RGLG2 
 tae-r.2   123150935   E3 ubiquitin-protein ligase RGLG4 
 tae-r.2   123157366   E3 ubiquitin-protein ligase RGLG4 
 tae-r.2   123165462   E3 ubiquitin-protein ligase RGLG4 
 hvu-r.1   123409311   E3 ubiquitin-protein ligase RGLG4-like 
 bdi-r.1   100836874   E3 ubiquitin-protein ligase RGLG4 
 osa-u.5   4344608   E3 ubiquitin-protein ligase RGLG4 
 zma-u.5   100383284   uncharacterized LOC100383284 
 sbi-r.1   8076530   E3 ubiquitin-protein ligase RGLG4 
 ath-u.5   RGLG4   Ca(2)-dependent phospholipid-binding protein (Copine) family 
 gma-u.5   100803177   E3 ubiquitin-protein ligase RGLG4 
 gma-u.5   100795579   E3 ubiquitin-protein ligase RGLG4 
 gma-u.5   100790153   E3 ubiquitin-protein ligase RGLG4 
 sly-u.5   101253786   E3 ubiquitin-protein ligase RGLG4 
 bra-r.6   103832414   E3 ubiquitin-protein ligase RGLG4 
 bra-r.6   103830487   E3 ubiquitin-protein ligase RGLG4 
 vvi-u.5   100250108   E3 ubiquitin-protein ligase RGLG4 
 ppo-u.5   7464565   E3 ubiquitin-protein ligase RGLG4 
 ppo-u.5   7460664   E3 ubiquitin-protein ligase RGLG4 
 mtr-u.5   25502446   E3 ubiquitin-protein ligase RGLG4 
 mtr-u.5   11428977   E3 ubiquitin-protein ligase RGLG4 
 mtr-u.5   25486898   E3 ubiquitin-protein ligase RGLG4 
 ghi-r.1   107909147   E3 ubiquitin-protein ligase RGLG4 
 ghi-r.1   107928392   E3 ubiquitin-protein ligase RGLG4 
 ghi-r.1   121212465   E3 ubiquitin-protein ligase RGLG4 
 bna-r.1   125589200   E3 ubiquitin-protein ligase RGLG4-like 
 bna-r.1   106406153   E3 ubiquitin-protein ligase RGLG4 
 bna-r.1   106363146   E3 ubiquitin-protein ligase RGLG4-like 
 sot-r.1   102578626   E3 ubiquitin-protein ligase RGLG2 
 cit-r.1   102622648   E3 ubiquitin-protein ligase RGLG4 
 nta-r.1   107797833   E3 ubiquitin-protein ligase RGLG4 
 nta-r.1   107778634   E3 ubiquitin-protein ligase RGLG4 
 cre-r.1   CHLRE_09g396475v5   uncharacterized protein 

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Top 50 coexpressed genes to 123148236 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123148236 (tae-r.2 coexpression data)

CoexMap"123148236"


taeLOC123148236 | Entrez gene ID : 123148236    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 1 1 1 1 1 1 3 1 2 1 2 3 3 3 1 1 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (1642 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (8281 genes)  IEA  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (1191 genes)  IEA  
Protein XP_044423551.1 [sequence] [blastp]
XP_044423552.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  pero 3,  nucl 2  (predict for XP_044423551.1)
chlo 5,  pero 3,  nucl 2  (predict for XP_044423552.1)
Subcellular
localization
TargetP
other 3,  chlo 3  (predict for XP_044423551.1)
other 3,  chlo 3  (predict for XP_044423552.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123148236
tae-r.2
for
123150935
tae-r.2
for
123157366
tae-r.2
for
123165462
hvu-r.1
for
123409311
bdi-r.1
for
100836874
osa-u.5
for
4344608
zma-u.5
for
100383284
sbi-r.1
for
8076530
ath-u.5
for
RGLG4
gma-u.5
for
100803177
gma-u.5
for
100795579
gma-u.5
for
100790153
sly-u.5
for
101253786
bra-r.6
for
103832414
bra-r.6
for
103830487
vvi-u.5
for
100250108
ppo-u.5
for
7464565
ppo-u.5
for
7460664
mtr-u.5
for
25502446
mtr-u.5
for
11428977
mtr-u.5
for
25486898
ghi-r.1
for
107909147
ghi-r.1
for
107928392
ghi-r.1
for
121212465
bna-r.1
for
125589200
bna-r.1
for
106406153
bna-r.1
for
106363146
sot-r.1
for
102578626
cit-r.1
for
102622648
nta-r.1
for
107797833
nta-r.1
for
107778634
cre-r.1
for
CHLRE_09g396475v5


Ortholog ID: 5222
Species tae tae tae hvu bdi osa zma sbi ath gma gma gma sly bra bra vvi ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna sot cit nta nta cre
Symbol LOC123150935 LOC123157366 LOC123165462 LOC123409311 LOC100836874 LOC4344608 LOC100383284 LOC8076530 RGLG4 LOC100803177 LOC100795579 LOC100790153 LOC101253786 LOC103832414 LOC103830487 LOC100250108 LOC7464565 LOC7460664 LOC25486898 LOC25486892 LOC25486894 LOC107909147 LOC121212465 LOC107893539 LOC106406153 LOC106363146 LOC106353410 LOC102578626 LOC102622648 LOC107797833 LOC107778634 CHLRE_09g396475v5
Function* E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4-like E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4 uncharacterized LOC100383284 E3 ubiquitin-protein ligase RGLG4 Ca(2)-dependent phospholipid-binding protein (Copine) family E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4-like E3 ubiquitin-protein ligase RGLG4-like E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 3
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00010 Glycolysis / Gluconeogenesis 2
vvi00052 Galactose metabolism 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00250 Alanine, aspartate and glutamate metabolism 2
ppo00260 Glycine, serine and threonine metabolism 2
ppo00630 Glyoxylate and dicarboxylate metabolism 2
ppo01200 Carbon metabolism 2
ppo01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00020 Citrate cycle (TCA cycle) 2
bna00270 Cysteine and methionine metabolism 2
bna00566 Sulfoquinovose metabolism 2
bna00620 Pyruvate metabolism 2
bna00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta04016 MAPK signaling pathway - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123150935 123157366 123165462 123409311 100836874 4344608 100383284 8076530 844276 100803177 100795579 100790153 101253786 103832414 103830487 100250108 7464565 7460664 25486898 25486892 25486894 107909147 121212465 107893539 106406153 106363146 106353410 102578626 102622648 107797833 107778634 5720336
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