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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   RGLG4   Ca(2)-dependent phospholipid-binding protein (Copine) family 
 ath-r.7   RGLG4   Ca(2)-dependent phospholipid-binding protein (Copine) family 
 ath-m.9   RGLG4   Ca(2)-dependent phospholipid-binding protein (Copine) family 
 ath-e.2   RGLG4   Ca(2)-dependent phospholipid-binding protein (Copine) family 
 ath-m.4.bio   RGLG4   Ca(2)-dependent phospholipid-binding protein (Copine) family 
 ath-m.4.hor   RGLG4   Ca(2)-dependent phospholipid-binding protein (Copine) family 
 ath-m.4.lig   RGLG4   Ca(2)-dependent phospholipid-binding protein (Copine) family 
 ath-m.4.str   RGLG4   Ca(2)-dependent phospholipid-binding protein (Copine) family 
 ath-m.4.tis   RGLG4   Ca(2)-dependent phospholipid-binding protein (Copine) family 
 bra-r.6   103832414   E3 ubiquitin-protein ligase RGLG4 
 bra-r.6   103830487   E3 ubiquitin-protein ligase RGLG4 
 bna-r.1   125589200   E3 ubiquitin-protein ligase RGLG4-like 
 bna-r.1   106353410   E3 ubiquitin-protein ligase RGLG4-like 
 bna-r.1   106354780   E3 ubiquitin-protein ligase RGLG4 
 ghi-r.1   121212465   E3 ubiquitin-protein ligase RGLG4 
 ghi-r.1   107928392   E3 ubiquitin-protein ligase RGLG4 
 ghi-r.1   107909147   E3 ubiquitin-protein ligase RGLG4 
 cit-r.1   102622648   E3 ubiquitin-protein ligase RGLG4 
 gma-u.5   100803177   E3 ubiquitin-protein ligase RGLG4 
 gma-u.5   100795579   E3 ubiquitin-protein ligase RGLG4 
 gma-u.5   100790153   E3 ubiquitin-protein ligase RGLG4 
 vvi-u.5   100250108   E3 ubiquitin-protein ligase RGLG4 
 ppo-u.5   7460664   E3 ubiquitin-protein ligase RGLG4 
 ppo-u.5   7464565   E3 ubiquitin-protein ligase RGLG4 
 mtr-u.5   25502446   E3 ubiquitin-protein ligase RGLG4 
 mtr-u.5   25486898   E3 ubiquitin-protein ligase RGLG4 
 mtr-u.5   25486894   E3 ubiquitin-protein ligase RGLG4 
 sly-u.5   101253786   E3 ubiquitin-protein ligase RGLG4 
 sot-r.1   102578626   E3 ubiquitin-protein ligase RGLG2 
 nta-r.1   107778634   E3 ubiquitin-protein ligase RGLG4 
 nta-r.1   107797833   E3 ubiquitin-protein ligase RGLG4 
 osa-u.5   4344608   E3 ubiquitin-protein ligase RGLG4 
 zma-u.5   100383284   uncharacterized LOC100383284 
 tae-r.2   123148236   E3 ubiquitin-protein ligase RGLG2 
 tae-r.2   123150935   E3 ubiquitin-protein ligase RGLG4 
 tae-r.2   123157366   E3 ubiquitin-protein ligase RGLG4 
 hvu-r.1   123409311   E3 ubiquitin-protein ligase RGLG4-like 
 sbi-r.1   8076530   E3 ubiquitin-protein ligase RGLG4 
 bdi-r.1   100836874   E3 ubiquitin-protein ligase RGLG4 
 cre-r.1   CHLRE_09g396475v5   uncharacterized protein 

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Top 50 coexpressed genes to RGLG4 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to RGLG4 (ath-u.5 coexpression data)

CoexMap"844276"


athRGLG4 | Entrez gene ID : 844276      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 3 1 3 1 2 3 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009867 [list] [network] jasmonic acid mediated signaling pathway  (74 genes)  IMP  
GO:0009611 [list] [network] response to wounding  (271 genes)  IMP  
GO:0042742 [list] [network] defense response to bacterium  (363 genes)  IMP  
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  IDA  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (268 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_565206.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  E.R. 2,  mito 1  (predict for NP_565206.1)
Subcellular
localization
TargetP
mito 7,  chlo 5  (predict for NP_565206.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
RGLG4
ath-r.7
for
RGLG4
ath-m.9
for
RGLG4
ath-e.2
for
RGLG4
ath-m.4.bio
for
RGLG4
ath-m.4.hor
for
RGLG4
ath-m.4.lig
for
RGLG4
ath-m.4.str
for
RGLG4
ath-m.4.tis
for
RGLG4
bra-r.6
for
103832414
bra-r.6
for
103830487
bna-r.1
for
125589200
bna-r.1
for
106353410
bna-r.1
for
106354780
ghi-r.1
for
121212465
ghi-r.1
for
107928392
ghi-r.1
for
107909147
cit-r.1
for
102622648
gma-u.5
for
100803177
gma-u.5
for
100795579
gma-u.5
for
100790153
vvi-u.5
for
100250108
ppo-u.5
for
7460664
ppo-u.5
for
7464565
mtr-u.5
for
25502446
mtr-u.5
for
25486898
mtr-u.5
for
25486894
sly-u.5
for
101253786
sot-r.1
for
102578626
nta-r.1
for
107778634
nta-r.1
for
107797833
osa-u.5
for
4344608
zma-u.5
for
100383284
tae-r.2
for
123148236
tae-r.2
for
123150935
tae-r.2
for
123157366
hvu-r.1
for
123409311
sbi-r.1
for
8076530
bdi-r.1
for
100836874
cre-r.1
for
CHLRE_09g396475v5


Ortholog ID: 5222
Species ath bra bra bna bna bna ghi ghi ghi cit gma gma gma vvi ppo ppo mtr mtr mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol RGLG4 LOC103832414 LOC103830487 LOC106353410 LOC106363146 LOC106406153 LOC121212465 LOC107909147 LOC107893539 LOC102622648 LOC100803177 LOC100795579 LOC100790153 LOC100250108 LOC7460664 LOC7464565 LOC25486898 LOC25486894 LOC25486892 LOC101253786 LOC102578626 LOC107778634 LOC107797833 LOC4344608 LOC100383284 LOC123150935 LOC123157366 LOC123165462 LOC123409311 LOC8076530 LOC100836874 CHLRE_09g396475v5
Function* Ca(2)-dependent phospholipid-binding protein (Copine) family E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4-like E3 ubiquitin-protein ligase RGLG4-like E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4 uncharacterized LOC100383284 E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4-like E3 ubiquitin-protein ligase RGLG4 E3 ubiquitin-protein ligase RGLG4 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00020 Citrate cycle (TCA cycle) 2
bna00270 Cysteine and methionine metabolism 2
bna00566 Sulfoquinovose metabolism 2
bna00620 Pyruvate metabolism 2
bna00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00010 Glycolysis / Gluconeogenesis 2
vvi00052 Galactose metabolism 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00250 Alanine, aspartate and glutamate metabolism 2
ppo00260 Glycine, serine and threonine metabolism 2
ppo00630 Glyoxylate and dicarboxylate metabolism 2
ppo01200 Carbon metabolism 2
ppo01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 3
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844276 103832414 103830487 106353410 106363146 106406153 121212465 107909147 107893539 102622648 100803177 100795579 100790153 100250108 7460664 7464565 25486898 25486894 25486892 101253786 102578626 107778634 107797833 4344608 100383284 123150935 123157366 123165462 123409311 8076530 100836874 5720336
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